FC873365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_ARGMO (60S ribosomal protein L38 OS=Argas monolakensis GN=RpL38 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.170e-22 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRD-VVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MPKQ+ EIKDFLLTARRKDA+SV+IK++ D V KFKVRCSKYLYT+ V + EKA+KLKQSLPPGL V++L Sbjct: 1 MPKQLKEIKDFLLTARRKDAKSVRIKKNPDNVTKFKVRCSKYLYTIVVKEKEKAEKLKQSLPPGLQVKEL 70
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_LYSTE (60S ribosomal protein L38 OS=Lysiphlebus testaceipes GN=RpL38 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 5.407e-22 Identity = 48/69 (69.57%), Postives = 62/69 (89.86%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I EIKDFL+TARRKDA+SVKIK++ + VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREIKEIKDFLVTARRKDAKSVKIKKNAENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_JULON (60S ribosomal protein L38 OS=Julodis onopordi GN=RpL38 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.061e-22 Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I EIKDFLL ARRKDA+SVKIK++ D VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREITEIKDFLLKARRKDAKSVKIKKNPDNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_SPOFR (60S ribosomal protein L38 OS=Spodoptera frugiperda GN=RpL38 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.683e-21 Identity = 47/69 (68.12%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I +IKDFLL ARRKDA+SVKIK+++ VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_PLUXY (60S ribosomal protein L38 OS=Plutella xylostella GN=RpL38 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.505e-21 Identity = 47/69 (68.12%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I +IKDFLL ARRKDA+SVKIK++ + VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_ARTSF (60S ribosomal protein L38 OS=Artemia sanfranciscana GN=RPL38 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21 Identity = 47/69 (68.12%), Postives = 60/69 (86.96%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MPKQ+ EIKDFL+ ARRKDA+S KIK++ D KFK+RCS++LYTL + DSEKA+KLK+SLPPGL V++L Sbjct: 1 MPKQLMEIKDFLIKARRKDAKSCKIKKNPDNTKFKLRCSRFLYTLVITDSEKAEKLKKSLPPGLQVKEL 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_AEDAE (60S ribosomal protein L38 OS=Aedes aegypti GN=RpL38 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21 Identity = 46/69 (66.67%), Postives = 60/69 (86.96%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I E+KDFL+ ARRKDAR+VKIK++ + KFK+RCS+YLYTL V D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPQEIKEVKDFLIKARRKDARAVKIKKNENNTKFKIRCSRYLYTLVVQDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_BOMMO (60S ribosomal protein L38 OS=Bombyx mori GN=RpL38 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.978e-21 Identity = 46/69 (66.67%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP++I +IKDFL+ ARRKDA+SVKIK++ + VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_TIMBA (60S ribosomal protein L38 OS=Timarcha balearica GN=RpL38 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 46/69 (66.67%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MP+++ EIK+FLLTARRKDA+SVKIK++ + KFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPRELTEIKEFLLTARRKDAKSVKIKKNPENTKFKVRCSRFLYTLVITDREKAEKLKQSLPPGLQVKEV 69
BLAST of FC873365 vs. ExPASy Swiss-Prot
Match: RL38_CAEEL (60S ribosomal protein L38 OS=Caenorhabditis elegans GN=rpl-38 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 44 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 250 MPK+I EIKDFL+ ARRKDA+SVKIK++ + KFKVRC+ YLYTL V D +KA+KLKQSLPPG+ V++L Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKEL 69 The following BLAST results are available for this feature:
BLAST of FC873365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873365 ID=FC873365; Name=FC873365; organism=Citrus clementina; type=EST; length=510bpback to top |