FC873375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.054e-53 Identity = 95/206 (46.12%), Postives = 136/206 (66.02%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P+ IWG+L+ A RVHG ELAE A ++ ++P++ G VLLSN+YA RW DVG+LR M+++G+ K S IE+ N+ + F D H + D+I+ L E+ +K AGYV L D+E+EEK ++ +HSE+LA+ YG++ IR++KNLRVCEDCHN IK ++++ R I++RD RFHH+KDG CSC DYW Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53 Identity = 93/207 (44.93%), Postives = 143/207 (69.08%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSAL-VDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P ++W L+AAC H ++LAE ++++ +LD H G V+LSN+YA++K+W+ V LRK MK+R +K CS IE+NN V+EF + D T +++ L+E++ ELK +GYVPD + ++ D+EK + +HSEKLA+ +GL+++ + IR+VKNLRVC DCHN KL+S ++ R++V+RD RFHH++DG CSC D+W Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53 Identity = 102/207 (49.28%), Postives = 138/207 (66.67%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKP-AGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P ++W +L+ AC HG IELAE ++L +LDP++ G LVLLSN YA +W+DV +RKSM + I K A S +E+ +Y+F ++ + +EKL E+I LK AGY P++ SAL D+E+EEK + + HSEKLAL + L K + IRIVKNLR+C DCH +KL SKVY EI++RDR RFH +KDG CSC+DYW Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP386_ARATH (Pentatricopeptide repeat-containing protein At5g15340, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53 Identity = 98/208 (47.12%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLED--EEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 PN V+ GSL+ +C VHG++E+AE ++L+Q+ P + +L+SN+Y + R LR S+++RGI K S I +N+ V+ F + DRSH +T +IY KLNEVI ++ AGYVPD+ + E EEK + + HSEKLA+C+GL+ +K + + + KNLR+C DCH+ +K+VSKVY REI+IRDR RFH +K G CSC DYW Sbjct: 416 PNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53 Identity = 91/206 (44.17%), Postives = 142/206 (68.93%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P+ IWG+L++ACRVHG ++L + ++ L +++P+H G VLLSN+YA +W+ V E+R +G+ K S +E++N+V F T +++H +++Y +L + ++LK GYVPD L D+ED+EK +++ HSE+LA+ + LI++ + IRI KNLRVC DCH+ K +SK+ REI++RD RFHH+K+GVCSC DYW Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.830e-53 Identity = 95/202 (47.03%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 13 IWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 ++ +L+AACRV G+ E + A +LL+L+P A VLLSN+YA +W ++ R MK + K+ S IE+ N+++ F+ DRS++QT+ IY K+ ++I ++K GYVP+ LVD+E+EEK + +HSEKLA+ +GL+S+ + IR++KNLRVC DCHN +K ++KVY REIV+RD RFH +KDG+CSC DYW Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53 Identity = 89/206 (43.20%), Postives = 144/206 (69.90%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P +W +L+++C VH +ELAE A+++ +D ++ GA VL+ N+YA + RW+++ +LR M+++G+ K+ ACS IEM N+ + F++ DRSH D+I E L V+ +++ GYV D L D+++E KRE++ HSE+LA+ +G+I+++ + IR+ KN+R+C DCH IK +SK+ REI++RD +RFHH+ G CSC DYW Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.920e-53 Identity = 94/206 (45.63%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P V +WG+L++AC+ H +EL E+ A+QL +DP + G V LSN+YA + W V E+R MKE+G+ K+ CS +E+ + F D+SH + ++I ++ + S LK G+V + ++L DL DEE E + HSE++A+ YGLIS+ + + +RI KNLR C +CH KL+SK+ REIV+RD RFHH+KDGVCSC DYW Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.987e-52 Identity = 95/203 (46.80%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 10 VIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 V+W S++ +C++HG+ L + A+ L+ L+ + G VLLSNIYA ++ V ++R MKE+GI+KE S IE+ N+V+EF DR H ++ +IY L ++ +K GYVP+ ++ L DLE+ EK + + HSE+LA+ YGLIS+K S ++I KNLRVC DCH KL+SK+ R+IV+RDR RFHH+ DG CSC D+W Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of FC873375 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.595e-52 Identity = 92/206 (44.66%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 1 PNVVIWGSLMAACRVHGEIELAEFTAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 618 P+ +W SL+ A R++ +EL +K++L+L+ + GA VLLSNIYA W +V +R+SMK +G+ K+ CS +E+N EV+EF D+SH + QI ++ L+ AGY D + D+++EEK + + HSEK A+ +G++S K+D IRIVKNLRVC DCH ++SK++ REI++RDR RFHH+KDG CSC +W Sbjct: 407 PHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612 The following BLAST results are available for this feature:
BLAST of FC873375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873375 ID=FC873375; Name=FC873375; organism=Citrus clementina; type=EST; length=700bpback to top |