FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_EUBE2 (Chaperone protein dnaJ OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30
Identity = 77/213 (36.15%), Postives = 105/213 (49.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+N  PG   AE KFKE S AY VLSD EKR  YD+FG A   G   G      G   F+                                  D+R ++ ++F+ES+ G  + I+V+  + C SC GTGAK     ++C  C GRG V  TQ++  G++     C  C G GKII + C  C G G + SK++++V IP G+ NG
Sbjct:   29 LAKKYHPDMN--PGDKEAEIKFKEASEAYAVLSDAEKRRQYDQFGHAAFEGGAGGA-----GAGGFDFDFGDMGDIFGDLFGGMFGGGGSRRNSNGPRRGADVRVNVRITFDESVRGTTKKIDVTLKDECSSCHGTGAKPGTSPETCSKCGGRGQVTFTQQSFLGMVRSQQPCPDCHGTGKIIKEKCPDCYGTGYISSKKTIEVNIPAGIDNG 234          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPH (Chaperone protein dnaJ OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30
Identity = 72/217 (33.18%), Postives = 110/217 (50.69%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD N  PG   AE KFKE S AY VLSD EK+  +D+FG A              G   F+                                  ++R  + ++FEE++FG ++ +E+S  + C++C G+GAK  +  ++C  C G+G V  TQ++ FG++  V TC  C G GKII + C  C G+G +  K+ ++V +P G+ NG +++
Sbjct:   29 LAKQYHPDAN--PGDQTAEAKFKEASEAYAVLSDPEKKRQFDQFGHAAF-------EQGGGGAGGFDFNMGDMGDIFGDIFGDIFGGGRRSRASNGPMNGANLRTAIRITFEEAVFGCEKELELSLKDECETCHGSGAKPGSSAETCHKCNGKGQVTFTQQSLFGMVRNVQTCPDCRGTGKIIKEKCPDCYGSGYISRKKKIQVSVPAGIDNGQSIR 236          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CAUCR (Chaperone protein dnaJ OS=Caulobacter crescentus GN=dnaJ PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.035e-29
Identity = 75/216 (34.72%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   49 LIMQYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS-QGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L M++HPD N     A  +FKEI+ AY VLSD +KR+ YDRFG AG+ G   G      QG D  ++++              E                D+RYDL ++ E++  G +  I V    TC+ C G+GAK       C  C G G V  TQ    G  +    C +CGG G++++D C  C G+G+V+ +R + V IP GV +GA ++
Sbjct:   26 LAMEHHPDRNGGCENAAGRFKEINEAYSVLSDPQKRAAYDRFGHAGVNGPQGGPGGFGGQGFDASDIFN------DVFGDVFGEMFGGGRRQSNAPQRGQDLRYDLEITLEQAYAGAEVEITVPAAMTCEVCEGSGAKPGTSPSVCGTCGGAGRVRATQ----GFFAVERGCPRCGGSGRLVLDPCSNCHGHGQVRRERILSVRIPAGVDDGARIR 231          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_TERTT (Chaperone protein dnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 75/209 (35.89%), Postives = 101/209 (48.33%), Query Frame = 1
Query:   55 MQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            M++HPD N     AEEKFKE S AYEVLSD +KR+ YD+FG AG+ G+  G+   ++G   F                                   D+RY L LS E+++ G    I+V    +C +CGG+GAK      +C  C G G V   Q    G  S   TC  C G GK I D C +C G+G V+  +++ V +P GV  G
Sbjct:   30 MKFHPDRNPDDASAEEKFKEASEAYEVLSDKQKRAAYDQFGHAGVEGQ-GGMGGGAEGFGSFSDIFGDVFGDIFGGAGGGRGRGGPSRGA-------DLRYTLDLSLEDAVRGTSVKIKVPTLVSCTNCGGSGAKPGTTATTCNTCGGHGQVRMQQ----GFFSVQQTCPTCRGQGKTISDPCNKCHGHGRVEETKTLSVKVPAGVDTG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEH (Chaperone protein dnaJ OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 72/214 (33.64%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N        AEEKFKE+  AYE+LSD EK++ YD++G AG+     G    +QG   F    A             +A               D+RY + +S E++  G +  I V  ++ CD C G GA+  + +++C  C G G V  +Q    G  +   TC KC G GK I   C +C G G+++S+++++V IP G+  G
Sbjct:   28 LAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFGGAQGYGGF----AEAFGDIFGDIFGQQAGGRRGGGGPQAYRGADLRYSMEISLEQAAHGHEAQIRVPHWDDCDHCHGNGAEPGSSVETCPTCHGAGQVRVSQ----GFFTMQQTCPKCHGSGKYIPKPCTKCHGQGKLKSQKTLEVKIPAGIDEG 233          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 72/215 (33.49%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L ++YHPD NK    AEEKFKE + AYEVL D +KR  YD+FG+AG+     G        D  +++                                D+RY+L +S E++  G +  IE+   ETC  C G+GA   +    C  C G G V +TQ    G  S  +TC +C G GK+I + C+ C G G  + +R++ + IP GV +G+ ++
Sbjct:   28 LAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQ----GFFSVTTTCPRCKGKGKVISNPCKTCKGEGLTEKRRTIHIKIPAGVESGSRLK 238          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 72/215 (33.49%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L ++YHPD NK    AEEKFKE + AYEVL D +KR  YD+FG+AG+     G        D  +++                                D+RY+L +S E++  G +  IE+   ETC  C G+GA   +    C  C G G V +TQ    G  S  +TC +C G GK+I + C+ C G G  + +R++ + IP GV +G+ ++
Sbjct:   28 LAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQ----GFFSVTTTCPRCKGKGKVISNPCKTCKGEGLTEKRRTIHIKIPAGVESGSRLK 238          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEIN (Chaperone protein dnaJ OS=Haemophilus influenzae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29
Identity = 75/213 (35.21%), Postives = 105/213 (49.30%), Query Frame = 1
Query:   49 LIMQYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT--GEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  ++HPD N+ S  AEEKFKEI+ AYEVL DD+KR+ YD++G A     G   G      G D  +++               +                D+RYDL +S EE++ G  + I+++    CDSCGG+GA+  + +++C  C G G + + Q    G     S C  C G GK I   CR C G G V  K ++ V IP GV  G
Sbjct:   28 LASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYGHAAFEQGGGAGGFGGGFGGADFGDMFGDIFGDIFGGGGRGRQRVVRGE----------DLRYDLEISLEEAVKGTTKDIQINTLAHCDSCGGSGAEKGSKVETCPHCHGSGRIRRQQ----GFFVSESICPTCHGSGKKIEKPCRNCHGEGRVHKKENLSVKIPAGVDTG 226          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 78/226 (34.51%), Postives = 115/226 (50.88%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI---TGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYD------LHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L ++YHPD  K+PG   AE++FKE+S AYEVLSD +KR  YDRFG+ G     G + G        D    +                                  R        ++L+FEE+  G ++ + VS +++C++C G GA +   I+SC+ C G G V++++    G  S  STC +CGG+G+II D C  C G G V+ KRS+ V IP GV +G  ++
Sbjct:   25 LAVKYHPD--KNPGDAAAEKRFKEVSEAYEVLSDPQKRDSYDRFGKDGPFAGAGGFGGAGGMGNMEDALRTFMGAFGGEFGGGSFFDGLFGGLGEAFGMRSDPAGARQGASKKVHINLTFEEAAHGVEKELVVSGYKSCETCSGQGAVNPQGIKSCERCKGSGQVVQSR----GFFSMASTCPECGGEGRIITDPCSSCRGQGRVKDKRSVHVHIPAGVDSGMRLK 244          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 75/211 (35.55%), Postives = 102/211 (48.34%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L M+YHPD N     AEEKFKE S AYE+LSD EKRS+YDR G     G + G      G    +++S                               D+RY + L+ EE++ G ++ I  +    CD C G G+K+   +++CK C G G V   Q    G  S   TC  C G GKII + C  C G+G    +++++V IP GV NG
Sbjct:   28 LAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGS--------DLRYVMELTLEEAVKGVKKTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQ----GFFSVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGVDNG 226          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_EUBE27.921e-3036.15Chaperone protein dnaJ OS=Eubacterium eligens (str... [more]
DNAJ_CLOPH7.921e-3033.18Chaperone protein dnaJ OS=Clostridium phytoferment... [more]
DNAJ_CAUCR1.035e-2934.72Chaperone protein dnaJ OS=Caulobacter crescentus G... [more]
DNAJ_TERTT1.351e-2935.89Chaperone protein dnaJ OS=Teredinibacter turnerae ... [more]
DNAJ_RALEH1.351e-2933.64Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]
DNAJ_LEPBP1.351e-2933.49Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA1.351e-2933.49Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_HAEIN1.351e-2935.21Chaperone protein dnaJ OS=Haemophilus influenzae G... [more]
DNAJ_CHLPN1.765e-2934.51Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNAJ_ACIBY1.765e-2935.55Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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