FC873460

Overview
NameFC873460
Unique NameFC873460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACAC (Chaperone protein dnaJ OS=Lactobacillus acidophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 74/215 (34.42%), Postives = 111/215 (51.63%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFEL-YSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPD+N  PGAEEK+K+++ AYEVL D +KR+ YD+FG AG+ G+  G     QG        S              +                D+ Y L + F ++I G +  +  +  ETC++CGG G +      +C  C G G +  TQ++  G+I + +TC KC G G II   C+ CGG G V+ K +++V IP G+ NG  ++
Sbjct:   28 LAKKYHPDLNHEPGAEEKYKQVNEAYEVLHDKQKRAQYDQFGSAGVNGQ-GGFGGAGQGFGGAGFDTSGFGDFGDIFGDIFGQGARQQRVDPTQPQRGQDLDYTLTIDFMDAINGKKTQVSYTRDETCETCGGNGCEKGTHPITCDKCHGTGVMTVTQQSMLGMIRRQTTCDKCNGRGVIIEHPCKTCGGKGTVERKNTIEVDIPAGIDNGQQLR 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 79/219 (36.07%), Postives = 113/219 (51.60%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA----GITGEYDGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  G++EKFKE+  AYE LSDD+KRS YD+FG      G  G   G      G   F+ ++S+                              D++Y + LSFEE+ FG +  IE+   E+C++C G+GAK     ++C  C G G +   Q TPFG +     C+ C G GK I   C  CGG+G+V+ ++ + V IP GV +G  ++
Sbjct:   28 LSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQFGHTDPNQGFGGGGFGGGGDFGGFGGFDDIFSSIF------------GGGARRRDPNAPRQGADLQYTMTLSFEEAAFGKEATIEIPREESCETCHGSGAKPGTDAKTCSHCGGSGQLNVEQSTPFGKVVNRRVCNYCSGTGKQIDHKCSTCGGSGKVRKRKKINVTIPAGVDDGQQLR 234          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 83/219 (37.90%), Postives = 108/219 (49.32%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS------QGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  QYHPD N  PG   AEEKFKEI+ AYEVLSD EKR +YD+FG A    +Y    +         G   F+  S              +                DI  DL L+ +ES+FG ++ I +   E C  CGG+G K  +    C+ C G G +   Q T FG  + + TC  CGG G II D CR CGG G V+ +R +K+ IP G+ +G
Sbjct:   29 LAKQYHPDAN--PGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAAFDPKYGAQGSGGFSGGFGGGFADFDFGS--FGDIFEDLFEGFDIFGTSRRRKEAPRKGADIYVDLELTLKESVFGCEKEIPIYRTEKCSVCGGSGVKPGSAPVRCQKCGGTGQIRSRQATFFGEFTTIKTCDACGGTGTIITDPCRECGGTGNVRRQRRVKINIPAGIDDG 243          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLS (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33
Identity = 75/223 (33.63%), Postives = 115/223 (51.57%), Query Frame = 1
Query:   58 QYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY-----------DGLSNTSQGVDPFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            +YHPD+NK  GAE+K+KE+  AYE LSD++KR+ YD++GEAG  G +            G    S G   FE ++S+                              D++Y ++L FEE+IFG ++ ++ +  E C +C G+GAK+    ++C  C GRG +   + TP G +   +TC  C G GK I + C  C G+G  +   ++KV +P GV  G  M+
Sbjct:   31 KYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGANGGFGGGGFGGASGFSGFGGASGGFGGFEDIFSSFFGGGGAQVNPNAPRQGD------------DLQYRINLKFEEAIFGVEKQVKYNREELCHTCDGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEIKEKCTTCHGSGHEKVAHTVKVTVPAGVETGQKMR 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACJO (Chaperone protein dnaJ OS=Lactobacillus johnsonii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 76/222 (34.23%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE-------YDGLSN----TSQGVDPF-ELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+N  PGAEEK+KE++ AYEVL D +KR+ YD+FG+AG+ G+       + G       +SQG   F +++               +                D+ Y + + F ++I G +  I  +  E C +C G+GA+      +C  C G G +  T++TP G+I Q +TC KCGG G II   C+ C G G V  K++++V +P G+ NG
Sbjct:   28 LAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKRAQYDQFGQAGVNGQGGFGGQGFGGFGGQGGYSSQGFGDFGDIFGDIFGSAFGGGRSRVDPTAPQKGQ--------DLDYTMTIDFMDAIKGKKTDITYTRSEVCPTCDGSGAEKGTHPITCDKCHGSGVMTVTRQTPLGVIQQQTTCDKCGGRGTIIEHPCQTCHGQGTVDKKQTLQVTVPAGIDNG 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 77/219 (35.16%), Postives = 113/219 (51.60%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT-----GEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  G++EKFKE+  AYE LSDD+KR+ YD+FG          G + G      G D  +++S+                              D++Y + LSFE++ FG +  IE+   ETC++C G+GAK     ++C  C G G +   Q TPFG +     C  C G GKII + C  CGG G+++ ++ + V IP GV +G  ++
Sbjct:   28 LSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFD--DIFSSIF------------GGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.997e-33
Identity = 79/219 (36.07%), Postives = 110/219 (50.23%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT-----GEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  GA EKFKE+  AYE LSDD+KR+ YD+FG          G + G      G D  +++S+                              D++Y + LSFEE+ FG +  IE+   ETC++C G+GAK     ++C  C G G +   Q TPFG +     C  C G GK I   C  CGG G+V+ ++ + V IP GV +G  ++
Sbjct:   28 LSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFD--DIFSSIF------------GGGARRRDPNAPRQGADLQYTMTLSFEEAAFGKETTIEIPREETCETCSGSGAKPGTKPETCSHCGGSGQLNMEQSTPFGKVVNRRVCHYCNGTGKQIKHKCSTCGGTGKVKKRKKINVTIPAGVDDGQQLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.997e-33
Identity = 78/218 (35.78%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA----GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  +YHPDINK  GA+EKFKE+  AYE LSDD+KR+ YD+FG      G  G + G  +   G    +++S+                              D++Y + LSFE++ FG +  IE+   E C++C G+GAK      +C  C G G +   Q TPFG +     C  C G GKII + C  CGG G+V+ ++ + V IP GV +G  ++
Sbjct:   28 LSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTDPNQGFGGGFGGGGDFG-GFGFDDIFSSIF------------GGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETIIEIPREENCETCKGSGAKPGTKPDTCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTGKIIKNKCSDCGGTGKVKKRKKINVTIPAGVDDGQQLR 232          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_LACGA (Chaperone protein dnaJ OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.306e-32
Identity = 75/222 (33.78%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   49 LIMQYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE-------YDGLSN----TSQGVDPF-ELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 678
            L  +YHPD+N  PGAEEK+KE++ AYEVL D +K++ YD+FG+AG+ G+       Y G       +SQG   F +++               +                D+ Y + + F ++I G +  I  +  E C +C G+GA+      +C  C G G +  T++TP G+I Q +TC KCGG G II   C+ C G G +  K++++V +P G+ NG
Sbjct:   28 LAKKYHPDLNHEPGAEEKYKEVNEAYEVLHDKQKKAQYDQFGQAGVNGQAGFGGQGYGGFGGQGGYSSQGFGDFGDIFGDIFGSAFGGGRSRVDPTAPQKGQ--------DLDYTMTIDFMDAIKGKKTDITYTRSEVCPTCDGSGAEKGTHPITCDKCHGTGVMTVTRQTPLGVIQQQTTCDKCGGRGTIIKHPCQTCHGKGTIDKKQTLEVKVPAGIDNG 241          
BLAST of FC873460 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.306e-32
Identity = 80/227 (35.24%), Postives = 111/227 (48.90%), Query Frame = 1
Query:   49 LIMQYHPDINKSPG---AEEKFKEISSAYEVLSDDEKRSVYDRFGEA----------GITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 690
            L  QYHPD+N  PG   AEEKFKE + AY+VLSD EKR+ YD+ G +          G  G++ G        D F+++                                D+RYDL ++FEE+ FG ++ I+V   ETC  C G+G+       +C  C G G V  TQRTPFG I    TC  C G G+ I   C+ C G G  +  +++KV +PPG  +G  ++
Sbjct:   27 LARQYHPDVN--PGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFG------DIFDMFFGGGGGGGQRRQGPTRGN--------------DLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTGQVKATQRTPFGAIQTARTCPACNGSGQFISSPCKECSGKGTTRKVKTIKVTVPPGSEDGLNLR 231          
The following BLAST results are available for this feature:
BLAST of FC873460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LACAC4.487e-3334.42Chaperone protein dnaJ OS=Lactobacillus acidophilu... [more]
DNAJ_BACP24.487e-3336.07Chaperone protein dnaJ OS=Bacillus pumilus (strain... [more]
DNAJ_ANATD4.487e-3337.90Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ_LACLS5.861e-3333.63Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_LACJO7.654e-3334.23Chaperone protein dnaJ OS=Lactobacillus johnsonii ... [more]
DNAJ_BACSU7.654e-3335.16Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]
DNAJ_BACLD9.997e-3336.07Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]
DNAJ_BACA29.997e-3335.78Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]
DNAJ_LACGA1.306e-3233.78Chaperone protein dnaJ OS=Lactobacillus gasseri (s... [more]
DNAJ_DESHY1.306e-3235.24Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873460 ID=FC873460; Name=FC873460; organism=Citrus clementina; type=EST; length=691bp
TAACGGCACCAGCTATAATCTTTTTGATTTTGTTAATGTCTTCTTGTTTT
GATTATGCAGTATCATCCGGATATCAACAAGAGTCCTGGAGCTGAAGAGA
AGTTCAAAGAGATAAGTTCTGCGTATGAGGTCCTTTCAGATGATGAGAAA
AGATCTGTATATGATCGCTTTGGTGAGGCAGGTATAACTGGAGAATATGA
TGGATTGAGCAACACTTCACAGGGGGTGGATCCTTTTGAATTATATAGTG
CATTCTTTGGTGGTTCAGATGGGCTCTTTGGAGGAGTGGGTGAGGCCGGA
GGCATTAACTTCAATTTTGGAAACAAAGGAAATTTTGGTCTTGACATTCG
GTATGACCTGCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACAGCGTG
GGATTGAAGTTTCTTGTTTTGAAACATGTGATAGTTGTGGTGGAACTGGT
GCCAAATCTAGTAATTGCATACAATCATGTAAAGCTTGTTGGGGTAGAGG
AGGAGTACTGAAAACTCAGAGAACACCATTTGGATTAATCTCACAGGTAT
CTACATGCTCTAAGTGTGGTGGTGATGGTAAGATAATAATTGATCATTGC
CGAAGATGTGGTGGTAATGGTGAAGTACAGTCAAAAAGAAGTATGAAAGT
GGTTATCCCACCTGGTGTTAGTAACGGAGCCACCATGCAAA
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