FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 253 K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 444 KKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 277 +RA+ P + I NAG +GSVV K+L ++ + +GYNA TG Y D++A+GIIDP KVVR L+ A+S++ + ++ +VVE+ + PAMP G Sbjct: 444 RRAIQAPARQIVANAGDDGSVVVGKILENETYTFGYNAQTGEYVDMVASGIIDPAKVVRTALQDAASISALIITTEALVVELPKKAAAAPAMPGG 538
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16 Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 286 AL PL IA+NAG NG+VV+E V S + GYNAATG Y D+++AGI+DP KV R L++A+S+A L ++C+V ++ E + + AG M Sbjct: 446 ALTSPLMRIAENAGANGAVVAENVKSKPVND-GYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSSSAGGGM 537
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_GEOSL (60 kDa chaperonin OS=Geobacter sulfurreducens GN=groL PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE---IKEPEPAMPAG 277 KR+L P++ IA+NAGV+GS+V +KV +S + +GYNAA Y D++AAGIIDPTKV R L++A+SVA L ++ ++ + + P PAMP G Sbjct: 443 KRSLEEPIRQIAQNAGVDGSIVVDKVKNSKD-AFGYNAAEDEYVDMLAAGIIDPTKVSRSALQNAASVAGLMLTTEAMIADKPKEEAPMPAMPGG 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BORPD (60 kDa chaperonin OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=groL PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 271 RA+ PL+ I NAG SVV VL+ + YGYNAATG Y DL+ G++DPTKV R L++A+SVA L ++ VVE+ E +PA P Sbjct: 445 RAVEEPLRTIVTNAGEEASVVVNNVLNGKGN-YGYNAATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELSEDKPAAP 532
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH603_BRASB (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMD 289 +RA+ P++ I +NAG +GS+V K+L D + +G+NAATG Y+DL+ AG+IDP KVVR L+ A+SVA + ++ +V + + A A MD Sbjct: 444 RRAIQVPVRQIVQNAGEDGSLVVGKLLEKDTYSWGFNAATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVADKPKKAEATQAAPAMD 539
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RAL PL+ IA+NAG NG VV ++V +S G+NA TGN+EDLM AGI+D +KVVR L+ A S+A + ++ VV + +PEP PAG D G Sbjct: 443 QRALSAPLRQIAENAGSNGDVVVDRVRNSGE---GFNALTGNFEDLMNAGILDASKVVRLALQDAVSIASLVVTTEVVVAD--KPEPPAPAGGGGDPMG 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_SALAI (60 kDa chaperonin 1 OS=Salinispora arenicola (strain CNS-205) GN=groL1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA---GNPMD 289 K AL PL+ IA NAG+ G VV E V + +G NAATG Y DLMAAGIIDP KV R L++ASS+A FL ++ VV + E PA PA G MD Sbjct: 442 KIALDGPLRQIAVNAGLEGGVVVEHVRGIEAG-HGLNAATGGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAAPGGGEMD 539
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_RALEJ (60 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groL PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.657e-16 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 277 RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 445 RAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_CUPTR (60 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groL PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.657e-16 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 277 RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 445 RAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGG 536 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |