FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ARTS2 (60 kDa chaperonin 2 OS=Arthrobacter sp. (strain FB24) GN=groL2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 244 +RAL PL+ IA+NAG +G VV+ KV S ++ G+NA +G+YEDL+AAG+IDP KV R L +A+S+A L ++ +VVE Sbjct: 444 RRALVQPLRWIAQNAGFDGYVVAAKVAESAVNQ-GFNAKSGDYEDLIAAGVIDPVKVTRAALRNAASIAALVLTTETLVVE 523
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN 280 +RAL PL+ IA+NAG NG+++ E+V GY+AA Y ++ AGI+DP KV R L++A+S+A L ++C++V+ EP+ PAG+ Sbjct: 444 ERALSAPLRRIAENAGQNGAIIVERVKEKP-FDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECIIVDKPEPKENNPAGS 535
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_STRAL (60 kDa chaperonin 1 OS=Streptomyces albus G GN=groL1 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN 280 +RA PL+ IA+NAG+ G V++ KV D + G+NAATG Y DL+ AG+IDP KV R LE+A+S+A L ++ +VVE K E AG+ Sbjct: 444 RRAAVEPLRWIAENAGLEGYVITTKVAELDKGQ-GFNAATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVE-KPAEEEPEAGH 534
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE----PAMPAGNPMD 289 +AL PLK IA NAG G+++ ++VLS + + GY+A Y D++ AGI+DPTKV RC LE A+SVA L ++ ++ +I E + PAMP G MD Sbjct: 447 KALSAPLKQIAANAGKEGAIICQQVLSRSSSE-GYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEALIADIPEEKSSSAPAMP-GAGMD 543
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 37/90 (41.11%), Postives = 61/90 (67.78%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 274 +AL P++ IA+NAG +G+V+ EK+L+SD+ YG++A G + ++ GIIDP KV R L++A+S+A L ++ +VVE E + P+ Sbjct: 444 KALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKETPS 533
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_STAHJ (60 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 39/85 (45.88%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 259 +AL P++ IA+NAG+ GSV+ E++ +D G+NAAT + +++ GI+DPTKV R L+HA+SVA FL ++ VV I EP+ Sbjct: 442 KALSAPVRQIAENAGLEGSVIVERLKHADAG-VGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVATIPEPD 525
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_SHEPA (60 kDa chaperonin OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ ASS+A + ++C+V E+KE M M G Sbjct: 445 RAMEAPLRQIAANAGEEGSVVANNVKNGTGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTECMVAEVKEDAADMGGMGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RAL PL+ I N G +G+VV E+V + +G+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + ++KE + MPA P G G Sbjct: 444 RRALEEPLRQIVANTGTTDGAVVLERVKAGTGD-FGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDVKEEKSDMPAMPPGGMGGMG 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP------AMPAGNPMDNSGYG 304 KRA+ PL+ I+ NAG GS+V +V + YG+NAA Y D++ AGIIDPTKVVR L++ASSVA L ++ + E+ + E MP G P G G Sbjct: 443 KRAMEEPLRQISANAGAEGSIVVNQVRGGAD-TYGFNAAADEYCDMIEAGIIDPTKVVRSALQNASSVAGLMLTTEACIAELPKEEAGGGMPGGMPGGMPGGMGGMG 548
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-----PAMP 271 KRAL P++ IA+NAG+ GSV+ EK L G+NAAT + D++ AGI+DPTKV R L++A+SV+ L ++ VV + EPE PA P Sbjct: 441 KRALEEPVRQIAENAGLEGSVIVEK-LKEQKPGVGFNAATNEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPESNNQMPATP 534 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |