FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_PARDE (60 kDa chaperonin OS=Paracoccus denitrificans GN=groL PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RAL P++ IA+NAGV+G+VV+ KV S + +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ E +PEP PAG D G G Sbjct: 444 RRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAE--KPEPKAPAGGMPDMGGMG 542
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 KRA+ PL+ I NAG G+V+ +KV +GYNA +E+L AG+IDP KV R LE+A+S+A FL ++CV+ E KE PAMP NP G G Sbjct: 444 KRAIEEPLRQIVANAGKEGAVIVQKVKEGKGD-FGYNARKDCFENLCEAGVIDPAKVTRVALENAASIAGMFLTTECVIAEKKEETPAMPPMNPGMGGGMG 543
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP---AGNPM 286 RAL P++ IA+NAG +GSV+ +K+ +N + GYNAAT +E+++ AGIIDPTKV R L++A+S+A L ++ VV EI EP+ A P AG PM Sbjct: 443 RALSAPVRQIAENAGKDGSVILDKLEHQEN-EIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAVVAEIPEPKQAAPQGGAGAPM 538
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 444 RRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 444 RRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH603_BRASO (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 298 +AL P++ IA+NAGV GS+V K+L + +G++A T +Y D++A GIIDP KVVR L+ ASSVA + ++ +V E+ K+ PAMPAG M G Sbjct: 445 KALEAPMRQIAENAGVEGSIVVGKILEEKSETFGFDAQTEDYVDMVAKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAELPKDAAPAMPAGGGMGGMG 543
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 286 AL PL IA+NAG NG+VV+E V S + GYNAATG Y D+++AGI+DP KV R L++A+S+A L ++C+V ++ E + + PAG M Sbjct: 446 ALTSPLMRIAENAGANGAVVAENVKSKPVND-GYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDSSPAGGGM 537
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RA+ PL+ I+ N G GS+V KV + +G+NAATG YEDL+ AG+IDPTKV R L++A+SVA L + +V E + E A PAG M G Sbjct: 443 RRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESAAPAGGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_BURXL (60 kDa chaperonin 2 OS=Burkholderia xenovorans (strain LB400) GN=groL2 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17 Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 283 RAL PL++IA NAG SVV KVLS + YGYNAATG Y DL+ G++DPTKV R L++A+S+A L +D V E + E A+PA P Sbjct: 445 RALEAPLRVIAANAGDEPSVVVAKVLSGKGN-YGYNAATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAP 536
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17 Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 277 +RAL P + IA+NAG S+V K+L D YGYNA TG Y D++ GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 443 RRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNAQTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |