FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17 Identity = 45/101 (44.55%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 307 RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ A PAG + Y Sbjct: 445 RALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_GRABC (60 kDa chaperonin OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=groL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 43/99 (43.43%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +RAL PL+ I++NAG +G+V++ KVL + + +G++A TG ++DL++AGIIDP KVVR L+ A+SVA + ++ ++ E +PE PAG P G Sbjct: 444 RRALQSPLRQISENAGEDGAVIAGKVLENGTYNFGFDAQTGEFKDLVSAGIIDPAKVVRTALQDAASVAALLITTEAMIAE--KPEKKAPAGAPPGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 304 +RA+ PL+ IA NAG GS+V EKV + +G+NAATG YEDL+ AG+IDP KV R L++A+SVA L ++C + E +PEP A P D G G Sbjct: 444 RRAIEEPLRQIALNAGFEGSIVVEKVREGKDG-FGFNAATGEYEDLIKAGVIDPKKVTRTALQNAASVASLLLTTECAIAE--KPEPKKDAAMP-DMGGMG 540
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_CAUCR (60 kDa chaperonin OS=Caulobacter crescentus GN=groL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 286 +RAL P++ IA+NAGV GS+V K+L +DN +G+NA T Y DL+ G+IDP KVVR L++A+SVA + ++ +VE + PAG M Sbjct: 444 RRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASVAGLLITTEAAIVEAPKKGGGAPAGGGM 538
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_CAUCN (60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groL PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 286 +RAL P++ IA+NAGV GS+V K+L +DN +G+NA T Y DL+ G+IDP KVVR L++A+SVA + ++ +VE + PAG M Sbjct: 444 RRALQAPIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAASVAGLLITTEAAIVEAPKKGGGAPAGGGM 538
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 307 +L PL IA+NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 446 SLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 277 +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 446 SLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_RHOPA (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groL1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 298 +AL P++ IA+NAGV GS+V K+L + +G++A T Y D++A GI+DP KVVR L+ ASSVA + ++ +V E+ K PAMPAG M G Sbjct: 445 KALEAPIRQIAENAGVEGSIVVGKILENKTETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVASLLVTTEAMVAELPKADAPAMPAGGGMGGMG 543
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 8 ALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 277 +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 446 SLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PAMP M G Sbjct: 445 RAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |