FC873466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PAMP M G Sbjct: 445 RAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_LAWIP (60 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groL PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 44/90 (48.89%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 271 +R+L PL+ IA NAG GS+V EKV + + +G+NAA+G YEDL+ AG+IDP KV R L++A+SVA L ++C + E EP+ MP Sbjct: 444 RRSLEEPLRQIAANAGYEGSIVVEKVREAKDG-FGFNAASGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP 532
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP---AGNPM 286 RAL P++ IA+NAG +GSV+ +K+ +N + GYNAAT +E+++ AGIIDPTKV R L++A+S+A L ++ VV EI EP+ + P AG PM Sbjct: 443 RALSAPVRQIAENAGKDGSVILDKLEHQEN-EIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAVVAEIPEPKQSAPQGGAGAPM 538
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNP 283 RAL P++ IA+NAGV GSVV E L + GYNAA YED++AAGI DPTKV R L++A+SV+ L ++ VV E E P PA PA NP Sbjct: 442 RALEEPVRQIAQNAGVEGSVVVEH-LKGEKPGVGYNAADNKYEDMVAAGITDPTKVTRSALQNAASVSALLLTTEAVVAEKPEDNPAPAAPAANP 535
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 KRA+ PL+ I NAG G+VV +KV +GYNA T YEDL AG++DP KV R LE+A+S+A FL ++CVV + KE PA P M G Sbjct: 444 KRAIEEPLRQIVNNAGKEGAVVVQKVKEGTG-AFGYNARTDVYEDLSEAGVVDPAKVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 298 +AL PL +A NAGV GSV+ EKV + ++ GYN TG EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE +PEPA PA M G Sbjct: 447 KALEAPLHQLASNAGVEGSVIVEKVKEATGNQ-GYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEALVVE--KPEPAAPAMPDMGGMG 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 289 +RA+ P++ IA+NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PAMPAG MD Sbjct: 444 RRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGMD 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH602_PARUW (60 kDa chaperonin 2 OS=Protochlamydia amoebophila (strain UWE25) GN=groL2 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 5 RALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAG 277 R+L PL+ IA+NAG G+++ + V K GYNA TG Y D++ AGI+DPTKVVRC LE+A SVA L ++ +V +I E P PA P G Sbjct: 446 RSLSAPLRQIAENAGQEGAIILQAV-EKMKEKEGYNALTGEYVDMITAGILDPTKVVRCALENAVSVAAMLLTTEAIVADIPEEKPAPAAPVG 537
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 289 +RA+ P + I +NAG +GS+V K+L + + +G+NAATG Y+DL+ G+IDP KVVR L+ A+SVA + ++ +V E K+ PA+P G MD Sbjct: 444 RRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEALVAEKPKKDVAPALPPGGGMD 541
BLAST of FC873466 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 2 KRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPA-MPA 274 +RAL P + IA+NAG +G+ + K+L D++ +G+NAATG YEDL+ +G+IDP KVVR L+ A+SVA + ++ +V E+ KE PA MPA Sbjct: 444 RRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDTPAPMPA 536 The following BLAST results are available for this feature:
BLAST of FC873466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873466 ID=FC873466; Name=FC873466; organism=Citrus clementina; type=EST; length=584bpback to top |