FC873471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21 Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 236 GSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 544 GS AVFGLG V SR+I +DI+ KF +AK G T+ +NPKDH +PI +V++ +T GVDYSFE IG + M AAL CH +G SVIVGV Sbjct: 3 GSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINSDKFAKAKELGATDCINPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGV 105
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.113e-16 Identity = 48/120 (40.00%), Postives = 57/120 (47.50%), Query Frame = 2 Query: 17 AGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 376 AG + D R GQ +Y TFS Y VVH SV KIDP P + CL+GCGV TG G+ TA V PG VA+ GLG V V ++ K D+A FG T Sbjct: 114 AGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPVEWKRDQALKFGAT 233
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.113e-16 Identity = 48/120 (40.00%), Postives = 57/120 (47.50%), Query Frame = 2 Query: 17 AGVMMNDRKSRFSINGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 376 AG + D R GQ +Y TFS Y VVH SV KIDP P + CL+GCGV TG G+ TA V PG VA+ GLG V V ++ K D+A FG T Sbjct: 114 AGESVTDGSFRIQARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPVEWKRDQALKFGAT 233
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.013e-14 Identity = 55/163 (33.74%), Postives = 73/163 (44.79%), Query Frame = 2 Query: 59 NGQPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 544 +G + +G F+ T+VH K+DP A LLGCGV GLGA NT V G VAV G G V +++I +D D KK + A G T VN + D + + V LT G G D + +G + A GT V+VGV Sbjct: 120 DGTELTPALGIGAFADKTLVHAGQCTKVDPAADPAVAGLLGCGVMAGLGAAVNTGAVSRGDSVAVIGCGAVGDAVIAGARLAGANKIIAVDRDAKKLEWATELGATHTVNATETD--VVEAVQALTGGFGADVVIDAVGRPETWKQAFYARDLA-GTVVLVGV 279
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: XYLB_PSEPU (Aryl-alcohol dehydrogenase OS=Pseudomonas putida GN=xylB PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 42/140 (30.00%), Postives = 68/140 (48.57%), Query Frame = 2 Query: 80 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDGGVDYSFECIGNVSVMRAAL 499 F G S+F+ Y + ++ + K+ PL+ + LGCG+ TG G+V N GS +A+FG G V + +I +D+ + + A G T +NP +D PI+ + D GV Y E G +V+ A+ Sbjct: 135 FFGQSSFATYALSYERNTVKVTKDVPLELLGPLGCGIQTGAGSVLNALNPPAGSAIAIFGAGAVGLSAVMAAVVAGCTTIIAVDVKENRLELASELGATHIINPAAND-PIEAIKEIFAD-GVPYVLETSGLPAVLTQAI 272
BLAST of FC873471 vs. ExPASy Swiss-Prot
Match: TERPD_PSESP (Probable alcohol dehydrogenase OS=Pseudomonas sp. GN=terPD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13 Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 2 Query: 80 FMGTSTFSQYTVVHDVSVAKIDP---QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVVVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 544 F G S+FS + + ++ KID AP++ + LGCGV TG GAV + V G V G G V SR+I + K ++A G TE ++P + + + + V +T+G G DY+ EC G VSVM A++ G +VGV Sbjct: 112 FFGQSSFSSMAMAREHNLVKIDALVDDAPIELLGPLGCGVQTGAGAVMISLDVRAGRSFLVLGGGAVGLSAVMAAKLRGCSRIIVSEPSAAKREQALALGATEVIDPLNEN--LVERVQQITEGQGCDYALECTGLVSVMEQAIDSMAMR-GQLAVVGV 267 The following BLAST results are available for this feature:
BLAST of FC873471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873471 ID=FC873471; Name=FC873471; organism=Citrus clementina; type=EST; length=552bpback to top |