FC873504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13 Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F +GF+ V +L + P E++ L+CG +L + AL ++D GY I +++ F D Q+ F TG+ R+P GG+A LN K++ +E++ + LP TC N L LPPY +K+ + +KL+ IS +G Sbjct: 635 AFYYGFHSVCASNALMLLRPEEVEILVCGSPDL-DMHALQRSTQYD-GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKIS------------------KNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEG 772
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13 Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F +GF+ V +L + P E++ L+CG +L + AL ++D GY I +++ F D Q+ F TG+ R+P GG+A LN K++ +E++ + LP TC N L LPPY +K+ + +KL+ IS +G Sbjct: 635 AFYYGFHSVCASNALMLLRPEEVEILVCGSPDL-DMHALQRSTQYD-GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKIS------------------KNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEG 772
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.171e-12 Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDD------LPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F+ GFN+V + L+ F EL+ +LCG +E+ W+ A+ H YT S I +++ E +++ QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL+YAI E +G Sbjct: 723 AFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKNAIYRH------YTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAEL------------------IGSNGPQKFCIDRVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEG 866
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.171e-12 Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDD------LPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F+ GFN+V + L+ F EL+ +LCG +E+ W+ + + H YT S I +++ E +++ QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL+YAI E +G Sbjct: 723 AFLDGFNEVAPLEWLRYFDEKELELMLCGMQEIDMSDWQKSTIYRH------YTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAEL------------------IGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEETEG 866
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 52/163 (31.90%), Postives = 72/163 (44.17%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 +F G + L++F HE + LL G + L + K+ GY+ S I E+M F P ++ +FVT R P G L P I + T+ A G + LPS TC N LKLP Y M +KL+YAI+ G F+LS Sbjct: 986 AFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWAAIGGQDV-----ERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAG-FELS 1142
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 6 FIFGFNQVF-DITSLQIFTPHELDHLLCGRREL--WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 F+ GF +VF + S+++F EL+ L+CG E ++ +L K+ G++ S A+ EI+ + Q+ QFVT + R+P G++ + K++++ H S DDLP TC N + L YS+K+ + KL++AI+E +G Sbjct: 746 FVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDS-----------------DDLPLAHTCFNEICLWNYSSKKKLELKLLWAINESEG 888
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.406e-12 Identity = 53/168 (31.55%), Postives = 76/168 (45.24%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F GFN++ LQ F EL+ LLCG +E+ W+ A+ H YT S I+ + + E +++ QFVTG RLP GG A L GP + ++ LP TC N L LPPY + E + +KL++AI E +G Sbjct: 717 AFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH------YTRTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADL------------------MGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 860
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 53/168 (31.55%), Postives = 75/168 (44.64%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F+ GFN+V + LQ F EL+ +LCG +E+ W+ + H YT S I+ + + E + + QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL++AI E +G Sbjct: 771 AFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRH------YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAEL------------------MGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 914
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 53/168 (31.55%), Postives = 75/168 (44.64%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F+ GFN+V + LQ F EL+ +LCG +E+ W+ + H YT S I+ + + E + + QFVTG RLP GG A L GP + D LP TC N L LPPY + E + +KL++AI E +G Sbjct: 775 AFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRH------YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAEL------------------MGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 918
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.811e-12 Identity = 55/172 (31.98%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 + I GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +FTPD++ F +FVT R P G A L P +I V T S G LP+ TC N LKLP YS K ++ +KL YAIS G F+LS Sbjct: 898 ALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTG-FELS 1068 The following BLAST results are available for this feature:
BLAST of FC873504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873504 ID=FC873504; Name=FC873504; organism=Citrus clementina; type=EST; length=819bpback to top |