FC873504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 45 LQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 +++F EL L+ G R+ + L + ++ GY + IV+ E++ EF +++ F +FVT P+ P G L+PK I + GT LP+ TC N LKLP Y K I+ +KL+YAI+ G FDLS Sbjct: 780 MEMFNSIELQMLISGERDNIDLDDLKSNTEYG-GYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGI-----------RNAGTEKYR-----LPTASTCVNLLKLPDYRNKTILREKLLYAINSG-ARFDLS 910
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12 Identity = 47/159 (29.56%), Postives = 72/159 (45.28%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHI-KFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 SF GF V + S ++F EL+ L+CG E ++ + ++ G+ SP + EI+ E QQR FVTG+ R+P G+ + +++ +R S D LP TC N + L Y KE + KL+ A+ E QG Sbjct: 695 SFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTRYQGGFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIPFRISRIR------------------SGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEESQG 835
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: ITCH_HUMAN (E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11 Identity = 52/168 (30.95%), Postives = 75/168 (44.64%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRREL----WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSE------SADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F GFN++ LQ F EL+ LLCG +E+ W+ A+ H Y S I+ + + E +++ QFVTG RLP GG A L GP + ++ LP TC N L LPPY + E + +KL++AI E +G Sbjct: 756 AFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYRH------YARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADL------------------MGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 899
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 54/172 (31.40%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 + I GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +FTP+++ F +FVT R P G A L P +I V T S G LP+ TC N LKLP YS K ++ +KL YAIS G F+LS Sbjct: 900 ALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTG-FELS 1070
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 47/158 (29.75%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 +F GF+ V +L + P E++ L+CG EL + AL ++D GY I +++ F + Q+ F TG+ R+P GG+A LN K++ +E++ + LP TC N L LPPY +++ + +KL+ IS +G Sbjct: 633 AFYCGFHSVCASNALMLLRPEEVEILVCGSPEL-DMHALQRSTQYD-GYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLNFKIS------------------KNETSTNWLPVAHTCFNQLCLPPYKSRKDLKQKLIIGISNSEG 770
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11 Identity = 45/163 (27.61%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 +F+ GF+ + +Q+F +EL+ LL G E+ + + ++ ++ GY + P I E++ + T +++ QFVTG+ R+P GG A + + + P T + LP+ TC N LKLP Y +KEI+ +L+ A+ G + ++ Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEI-DVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA 909
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11 Identity = 48/156 (30.77%), Postives = 73/156 (46.79%), Query Frame = 3 Query: 15 GFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFD--HGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 476 G N++ + LQIF +ELD LL G+R++ + + +F YT ++ E++ E++P+++ QF TG RLP G + H S P T LP TC N L +PPY++KE + +KL AI E G Sbjct: 528 GLNELIPDSVLQIFNENELDTLLNGKRDI----DVQDWKRFTDYRSYTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDM---------HGSDGPRKF---TIEKVGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAG 667
BLAST of FC873504 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11 Identity = 45/163 (27.61%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 3 SFIFGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 491 +F+ GF+ + +Q+F +EL+ LL G E+ + ++ ++ GY + P I E++ + T +++ QFVTG+ R+P GG A + + + P T + LP+ TC N LKLP Y +KEI+ +L+ A+ G + ++ Sbjct: 759 AFLQGFHMFIPPSLIQLFDEYELELLLSGMPEI-DVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA 909 The following BLAST results are available for this feature:
BLAST of FC873504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873504 ID=FC873504; Name=FC873504; organism=Citrus clementina; type=EST; length=819bpback to top |