FC873545

Overview
NameFC873545
Unique NameFC873545
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-XXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 439
            K +NILL E+++  + DFGLAK+    D THV+T V GT G+ AP+Y  TG+ + K+D++ +GV+LLELITG++A D  +   D +  L+ W              VD  ++G Y    + Q + ++ +C Q  P  RP +S+VV  L
Sbjct:  232 KCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQN--LVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEE 472
            K  NILLDE+ +A + DFGL++      +TH++T V GT G++ PEY  T +  EK+DV+ +G++LLE+IT Q   D +R  +     +  WV            +D ++ G+Y    V +++++A+ C   S + RP MS+V   L+   ++E   E
Sbjct:  706 KTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSH----ISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELKECLVSENLRE 859          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 57/168 (33.93%), Postives = 82/168 (48.81%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD-GLAERWEEWQKEEMFRQD 502
            K +N+L+D +    +GDFGLA+L +      TT V GTIG++APE    G SS  +DVF +GV+LLE+++G++  D           + DWV            +D  +   Y E E    + V LLC    P  RP M  V+R L  D  + E  + W   +  R D
Sbjct:  493 KPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD------SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEIHDNWGYSDSSRTD 654          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 442
            K+ NILLD  F+A +GDFGL++      +THV+T V G+ G++ PEY  T   +EK+DVF +GV+LLE+IT Q   D  R    +   + +WV            VD  M G+Y    + + +++A+ C   S   RP MS+V   L+
Sbjct:  718 KSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR----EKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 442
            K++NILLDE F + + DFGLA+LM   +THV+T + GT+G+I PEY     ++ K DV+ +GV+LLEL+T +R  D+ +     D  L+ WV             D  +     ++E+ +++++A LC   +P +RP   ++V  L+
Sbjct:  862 KSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRD--LISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLD 1006          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 57/169 (33.73%), Postives = 84/169 (49.70%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG-DGLAERWEEWQKEEMFRQDF 505
            K +N+L+D +    +GDFGLA+L +      TTA+ GTIG++APE    G  S  +DVF +GV+LLE++ G++  D           L+DWV            +D  +   Y   E    + V LLC    P  RP M  V+R L G + + E  +EW   +  R +F
Sbjct:  496 KPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD------SGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDEWGYSKSSRSEF 658          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 60/149 (40.27%), Postives = 86/149 (57.72%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 442
            K +NILLD E+ A + DFGLAK     D +HV+T + GT G+ APEYL+TG  + K+DV+ YGV+LLE+++G+RA D  R   +    L++W             V D+ ++  Y  EE  ++  +AL C       RP M+EVV  LE
Sbjct:  206 KTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQ--KLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = 2
Query:   14 ILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV----RMLEGDGLAERWEEW 475
            ILLD++F+A + D+GLAKL+   D  D+       G +G++APEY ST  +S K DV+G+G++LLEL+TGQ+   +          L+DWV            +D  +     +EE+ Q +++A  C    P ERP M +V      M +  G++E ++E+
Sbjct:  432 ILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTMIQVYESLKNMADKHGVSEHYDEF 592          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAK---LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 442
            K++NILLD ++ A V DFG+AK   +   K     + + G+ G+IAPEY+ T + +EK+D++ +GV+LLEL+TG++  D + L + D   +  WV            +D  ++  + +EE+ ++I + LLCT   P+ RP M +VV ML+
Sbjct:  821 KSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTD-SELGDKD---MAKWVCTALDKCGLEPVIDPKLDLKF-KEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQ 965          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 66/181 (36.46%), Postives = 100/181 (55.25%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQV---ALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNT 532
            KA NIL+  +FE  + DFGLAKL+D  D    +  V G+ G+IAPEY  + K +EK+DV+ YGV++LE++TG++  D       + + L+DWV            +DS +     E E ++++QV   ALLC   SP ERP M +V  ML+   + +  EE+ K ++       +P P  T
Sbjct:  921 KANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID---PTVPEGIHLVDWV---RQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK--EIKQEREEYAKVDLL---LKKSPPPTTT 1089          
The following BLAST results are available for this feature:
BLAST of FC873545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
RLCK7_ARATH4.326e-2037.84Probable serine/threonine-protein kinase RLCKVII O... [more]
PAM74_ARATH4.326e-2033.54Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH4.326e-2033.93Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y4245_ARATH5.649e-2037.16Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH5.649e-2035.37Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
LRKA1_ARATH5.649e-2033.73Lectin-domain containing receptor kinase A4.1 OS=A... [more]
APK1B_ARATH5.649e-2040.27Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y1719_ARATH7.378e-2034.16Probable inactive receptor kinase At1g27190 OS=Ara... [more]
RLK5_ARATH7.378e-2036.00Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
RCH2_ARATH7.378e-2036.46Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE09FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873545 ID=FC873545; Name=FC873545; organism=Citrus clementina; type=EST; length=807bp
GAAAGCCGCTAATATATTGTTGGATGAGGAATTTGAAGCTGTTGTTGGAG
ATTTCGGGTTGGCTAAACTCATGGATTACAAAGACACACACGTTACAACC
GCTGTACGTGGAACAATCGGACATATAGCTCCAGAGTACCTCTCTACTGG
AAAGTCGTCAGAGAAGACTGATGTTTTTGGGTATGGAGTCATGCTTCTTG
AACTCATCACGGGGCAGAGAGCTTTTGATCTTGCTCGGCTTGCTAATGAC
GACGACGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAGAA
GTTGGAACAGTTGGTTGATAGCGACATGGAGGGCAACTACATTGAGGAAG
AAGTGGAGCAGCTGATCCAGGTTGCTCTTCTGTGCACACAAGGGTCCCCA
ATGGAGCGACCGAAGATGTCAGAGGTGGTAAGAATGCTGGAAGGCGATGG
ATTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGATGTTCCGGCAAG
ATTTTAACCATACACCACACCCCAATAATACTTGGATTGTCGACTCAACT
TCTCACATCCAGCCAGATGAATTGTCTGGTCCTAGATGATATGGAAGTCT
TCTTGATGTGCTTTTTGTATGTGAAAGTGATATTTATAACATTTGTGCAT
ATAGGTTCCTTCTTCTTTTTCCCATTTTAATGTCCAGTTTATATTACAAA
TTGTACTTGTTTAGGCAATGTTGTAATTTTCTATAGGGTTGCCAAAGTCT
ATCGAGGAACTTTAGGTGCTAGCAAACAAGCGGGCATCCATGTCATGTCA
TCCTGTG
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