FC873642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 3 NVDINNLEE--YISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFD--HGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 560 N+ +NN + Y+ + + + T Q A + G N++ + LQIF +ELD LL G+R++ + + +F YT ++ E++ E++P+++ QF TG RLP G + H S P T LP TC N L +PPY++KE + +KL AI E G Sbjct: 494 NIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIFNENELDTLLNGKRDI----DVQDWKRFTDYRSYTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDM---------HGSDGPR---KFTIEKVGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAG 667
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14 Identity = 62/195 (31.79%), Postives = 88/195 (45.13%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 575 N YI L+ + T I Q A +GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +FTPD++ F +FVT R P G A L P +I V T S G LP+ TC N LKLP YS K ++ +KL YAIS G F+LS Sbjct: 875 NKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTG-FELS 1068
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: NEDD4_RAT (E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14 Identity = 56/181 (30.94%), Postives = 85/181 (46.96%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 560 N +EYI LV+ I +QM AF+ GF ++ ++IF +EL+ L+CG ++ + EH K+ +GY+ I + + +++ QFVTG R+P G A L + S P + T D LP TC N L LPPY + + ++ KL AI QG Sbjct: 715 NKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDV-DVNDWREHTKYKNGYSLNHQVIHWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAEL---------YGSNGPQSF---TVEQWGTPDKLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQG 882
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14 Identity = 61/195 (31.28%), Postives = 88/195 (45.13%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 575 N YI L+ + T I Q A +GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +FTP+++ F +FVT R P G A L P +I V T S G LP+ TC N LKLP YS K ++ +KL YAIS G F+LS Sbjct: 877 NKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTG-FELS 1070
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14 Identity = 53/185 (28.65%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 15 NNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVF-DITSLQIFTPHELDHLLCGRREL--WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 560 +N E++ V+ ++ I Q F +GF +VF + S+++F EL+ L+CG E ++ +L K+ G++ S A+ EI+ + Q+ QFVT + R+P G++ + K++++ H S DDLP TC N + L YS+K+ + KL++AI+E +G Sbjct: 721 SNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDS-----------------DDLPLAHTCFNEICLWNYSSKKKLELKLLWAINESEG 888
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14 Identity = 52/186 (27.96%), Postives = 88/186 (47.31%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 575 N EY+ LV + + I Q+ F GF+ + +Q+F +EL+ LL G E+ + ++ ++ GY I E++ E T +++ QFVTG+ R+P GG A + + + TA+ LP+ TC N LKLP Y +KEI+ +L+ A+ G + ++ Sbjct: 771 NKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSGMPEI-DVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFTIAAVAYTANL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA 944
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13 Identity = 51/186 (27.42%), Postives = 87/186 (46.77%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 575 N EY+ LV + + I Q+ F GF+ + +Q+F +EL+ LL G E+ + ++ ++ GY I E++ E T +++ QFVTG+ R+P GG A + + + T + LP+ TC N LKLP Y +KEI+ +L+ A+ G + ++ Sbjct: 739 NKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSGMPEI-DVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQNFTIAAVAYTPNL-----------LPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA 912
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 56/184 (30.43%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 27 EYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLN----PKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSF 566 EY+ LV + I Q+ AF GFN++ + IF EL+ L+ G E+ + L + ++ YTA SP I E++ F+ + F QFVTG ++P G L P+ + K + A + LPS TC N L LP Y +KE + ++L+ AI E F Sbjct: 3512 EYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEI-DFDDLKANTEYT-SYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHK---------------AYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGF 3678
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 61/195 (31.28%), Postives = 89/195 (45.64%), Query Frame = 3 Query: 18 NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMG-EFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTI----VRKHSSTAPNTASNGTG----PSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 575 N YI L+ + T I Q AF +GF + +++F+ EL L+ G + L +H + G+ I+ L +I+ +F+ +++ F +FVT R P G A L P +I V T S G + LP+ TC N LKLP YS K I+ +KL YAIS G F+LS Sbjct: 879 NKISYIHLMAHFRMHTQIKNQTVAFISGFRSIIRPEWIRMFSAPELQRLISGDNAEIDLDDLKKHTVYYGGFHGSHRVIIWLWDILANDFSSEEKAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKGILREKLRYAISMNTG-FELS 1072
BLAST of FC873642 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 54/185 (29.19%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 6 VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 560 V+ N +E++ VD + +AF AGF++V L +F P+EL ++ G ++ L ++ ++ Y A+ P I E+ E ++++ F F+TG+ R+P G+ L KL I S G G ++ LP TC N L LP Y+ KE + KL+ AI +G Sbjct: 888 VNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTN-YDWKELEKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSL--KLVI-----------QSTGGG-----EEYLPVSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEG 1053 The following BLAST results are available for this feature:
BLAST of FC873642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873642 ID=FC873642; Name=FC873642; organism=Citrus clementina; type=EST; length=740bpback to top |