FC873697

Overview
NameFC873697
Unique NameFC873697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.084e-24
Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  F  DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                 KL+++QN+RGG++ LQ +  P    D  E G  L A+E                HKV +++ND  + DF+E+ YL EQV++IK++ ++V +LRR+
Sbjct:    3 SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.028e-24
Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  F  DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                 KLM+ QN+RGG++ LQ +  P    D  E G  L A+E                HKV +++ND  + DF+E+ YL EQV++IK++ ++V +LRR+
Sbjct:    3 SQVRQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.260e-24
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P    +  E  + L AM+                HK+A+   D QL DF+ES+YL EQV+A+K++ +Y+ +L+R+
Sbjct:    3 SQVRQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.260e-24
Identity = 60/158 (37.97%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  347 LSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            +S  R  +  DCEAA+N  +N+E   SY Y +M+A+FDRD+VAL  +                K M+YQNKRGG+V LQ I  P    +  E G+ L AM+                HK+A    D  L DF+ES+YL EQV+ IK+I +++ +L+R+
Sbjct:    2 VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.172e-23
Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  +  D EAAIN QIN+E + SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A   ND  L DF+E+ YL+EQV+AIK++ ++V +LRR+
Sbjct:    7 SQVRQNYHQDSEAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECALHLEKNVNESLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRRM 159          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_HUMAN (Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.531e-23
Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P  + D  E G  L AME                HK+A   ND  L DF+E+ YL+EQV+AIK++ ++V +LR++
Sbjct:    2 TTASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKM 159          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.531e-23
Identity = 63/162 (38.89%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  +LM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A + ND  L DF+E+ YL+EQVEAIK++ +++ +LR++
Sbjct:    2 TTASPSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKM 159          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23
Identity = 61/157 (38.85%), Postives = 85/157 (54.14%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  F  DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +                K ++YQNKRGG+V LQ I  P    +  E G+ L A +                HK+A+   D  L DF+ES+YL EQV+A+K++ +Y+ +L+R+
Sbjct:    3 SQVRQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23
Identity = 64/162 (39.51%), Postives = 86/162 (53.09%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPL-SEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARGM 832
            S AR  F  +CE AIN+QINVE   +Y Y A F YFDRD+V+                    KL +YQNKR G+V+   I  P  +EF   E      AM                 H+VA+KNND  LADF+ES++LHEQ +AIK+ ++Y+   +RV +G+
Sbjct:    4 SRARQSFATECENAINKQINVELQAAYDYMAFFTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEFLHEQEDAIKQFADYLTETQRVGKGL 160          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23
Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  335 TVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            T    S  R  +  D EAAIN QIN+E   SYVY +M  YFDRD+VALK                  KLM+ QN+RGG++ LQ I  P  + D  E G  L AME                HK+A   ND  L DF+E+ YL+EQV+AIK++ ++V +LR++
Sbjct:    2 TTASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKM 159          
The following BLAST results are available for this feature:
BLAST of FC873697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH_PAGBE3.084e-2439.49Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_TRENE4.028e-2440.13Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH1_XENLA5.260e-2439.49Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRI2_RANCA5.260e-2437.97Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]
FRIH_HORSE1.172e-2340.76Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRIH_HUMAN1.531e-2340.74Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 ... [more]
FRIH_BOVIN1.531e-2338.89Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH2_XENLA1.999e-2338.85Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH2_SCHMA1.999e-2339.51Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_PONAB2.611e-2340.74Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873697 ID=FC873697; Name=FC873697; organism=Citrus clementina; type=EST; length=835bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGCAAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGATATCTGAGTATG
TTGCTCACCTGAGAAGAGTGGCCAGGGGCATGGTG
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