FC873697

Overview
NameFC873697
Unique NameFC873697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIL2_MOUSE (Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.886e-16
Identity = 47/158 (29.75%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVA 823
            S  R  ++ + EAA+N  +N+    SY Y ++  +FDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L A++                H + +   D  L DF+ES +L ++V+ IKK+  ++ +LRRVA
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVKLIKKMGNHLTNLRRVA 156          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15
Identity = 47/158 (29.75%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVA 823
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+     +  P  +    E G  L AME                H + +   D  L DF+E+ +L E+V+ IKK+ +++ +LRR++
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLS 156          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIL_PONAB (Ferritin light chain OS=Pongo abelii GN=FTL PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  ++ D EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q I  P  +    E G    AM+                H + + + D  L DF+E+ +L E+V+ IKK+ +++ +L R+
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNMYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSAHTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIL_HUMAN (Ferritin light chain OS=Homo sapiens GN=FTL PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  ++ D EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q I  P  +    E G    AM+                H + +   D  L DF+E+ +L E+V+ IKK+ +++ +L R+
Sbjct:    3 SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAED----EWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRIL_HORSE (Ferritin light chain OS=Equus caballus GN=FTL PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15
Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 2
Query:  350 SLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            S  R  ++ + EAA+N  +N+    SY Y ++  YFDRD+VAL+G+                +L++ QN+RGG+   Q +  P  +    E G  L AM+                H + +   D  L DF+ES +L E+V+ IKK+ +++ +++R+
Sbjct:    3 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLKMQNQRGGRALFQDLQKPSQD----EWGTTLDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRL 155          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FHL17_MOUSE (Ferritin heavy polypeptide-like 17 OS=Mus musculus GN=Fthl17 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 47/147 (31.97%), Postives = 65/147 (44.22%), Query Frame = 2
Query:  380 CEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRV 820
            CE AIN  I +    SY Y +M  YFDRD+VA +                    M  QNKRGG + LQ I  P  +  H        AME                H+VA +  D  L  F+E   L +QV+ +K++S Y+ +LR++
Sbjct:   16 CEDAINTHIQLCLYASYEYMSMAVYFDRDDVAQENFKRFFLTKSHNCQTSAEMFMHLQNKRGGCISLQDIARPERDSWHG----GFQAMECAFHMEMLINQSLLNMHEVAKEKGDPHLCHFLEQNCLDQQVDILKEMSGYLTNLRQM 158          
The following BLAST results are available for this feature:
BLAST of FC873697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIL2_MOUSE6.886e-1629.75Ferritin light chain 2 OS=Mus musculus GN=Ftl2 PE=... [more]
FRIL_FELCA1.175e-1529.75Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL_PONAB2.617e-1529.94Ferritin light chain OS=Pongo abelii GN=FTL PE=2 S... [more]
FRIL_HUMAN3.418e-1529.94Ferritin light chain OS=Homo sapiens GN=FTL PE=1 S... [more]
FRIL_HORSE3.418e-1529.30Ferritin light chain OS=Equus caballus GN=FTL PE=1... [more]
FHL17_MOUSE1.216e-1231.97Ferritin heavy polypeptide-like 17 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873697 ID=FC873697; Name=FC873697; organism=Citrus clementina; type=EST; length=835bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGCAAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGATATCTGAGTATG
TTGCTCACCTGAGAAGAGTGGCCAGGGGCATGGTG
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