FC875266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 4.696e-40 Identity = 85/162 (52.47%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 187 SPESPGSVD-PYSNMKFSPXXXXXXXXXXXXXXXMGFFSIYIRHCSDSSNS-VIXXXXXXXXXXXXXXXXXLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLAS--------EPGETTP 642 S PG + PY+ + SP MGFFSIY RHCS ++ V LD V++TFPTF+YSDVKT K+GKG LECA+CLNEFEDDETLRL+PKCDHVFHP CIDAWLE+H TCPVCR+NLA EPG T P Sbjct: 29 SQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEP 190
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.366e-39 Identity = 81/148 (54.73%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 211 DPYS-NMKFSPXXXXXXXXXXXXXXXMGFFSIYIRHCSDS-SNSVIXXXXXXXXXXXXXXXXXLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 648 DPY+ + SP MGFF++YIRHC+ + SV LD E I+TFPTFVYS+VKT K+GKGALECA+CLNEFEDDETLRL+PKCDHVFHP CI AWL+ H TCPVCR+NLA E TP+P Sbjct: 33 DPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLA----EQTPEP 176
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.029e-34 Identity = 69/120 (57.50%), Postives = 82/120 (68.33%), Query Frame = 1 Query: 286 MGFFSIYIRHCSDSSNSVIXXXXXXXXXXXXXXXXX---LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 636 +GFFS+YIR C + + LD +I+TFPTF YS VKTL++GK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL SHTTCP+CR++L PGE+ Sbjct: 77 LGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGES 196
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.707e-32 Identity = 70/143 (48.95%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 211 DPYSNMKFSPXXXXXXXXXXXXXXXMGFFSIYIRHCSDSSNSV-IXXXXXXXXXXXXXXXXXLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 636 D FSP +G S+Y+R C + + LD VI+TFPTF YS VKTL++GK ALEC VCLNEFEDDETLRLIP+C HVFHP CIDAWL S TTCP+CR+NL PGE+ Sbjct: 28 DDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGES 170
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.730e-29 Identity = 53/83 (63.86%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTP 642 L++EVI++FPTF+YS+VK LK+GKG +ECA+CL+EFED ETLR +P C H FH CID WL S +TCPVCR+NL+ +PGE+ P Sbjct: 95 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYP 177
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.034e-28 Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 289 GFFSIYIRHCSDSSNSVIXXXXXXXXXXXXXXXXXLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL---ASEPGE 633 G S+YIRHC+ S+ LD V+++FP F YS VK K+G LECA+CLNE ED ET+RL+P C+H+FH +CID WL SH TCPVCRSNL +++PG+ Sbjct: 60 GLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGD 177
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4B_ARATH (Putative RING-H2 finger protein ATL4B OS=Arabidopsis thaliana GN=ATL4B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 648 L++E++++FP F+YS+VK LK+GKG +ECA+CL+EF D ETLR +P C H FH CID WL S +TCP CR+NL+ +PGE+ P P Sbjct: 95 LEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSLKPGESYPYP 179
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27 Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG 630 L ++VI++FP+F+YS VK LK+GKG +ECA+CLNEFED+ETLRL+P C H FH CID WL S +TCPVCR++L +PG Sbjct: 100 LGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPG 178
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27 Identity = 49/74 (66.22%), Postives = 63/74 (85.14%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 615 LD E I+TFPTF+YS+VK +++GKG +ECAVCL EFEDDETLRL+P C HVFH +C+D WL H+TCP+CR++L Sbjct: 107 LDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 48/86 (55.81%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPS 651 +D++VI++FP F+YS+VK K+G G +ECA+CL EFED+E LR +P C H FH CID WL S +TCPVCR+NL+ + G++ P PS Sbjct: 92 IDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPS 177 The following BLAST results are available for this feature:
BLAST of FC875266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875266 ID=FC875266; Name=FC875266; organism=Citrus clementina; type=EST; length=673bpback to top |