FC875266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 28/45 (62.22%), Postives = 40/45 (88.89%), Query Frame = 1 Query: 475 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRS 609 +C+VCL+EFE++E+LRL+PKC+H FH CID WL+SH+ CP+CR+ Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 394 LDREVIDTFPTFV----YSDVKTLKVGKG-------ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLA---SEPGETTPQPS 651 LD VI P F Y + G+G + EC+VCL+EF+D+E LR+IP C H+FH +CID WL+++ CP+CR+ ++ S P + PS Sbjct: 99 LDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPS 198
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL4F_ARATH (RING-H2 finger protein ATL4F OS=Arabidopsis thaliana GN=ATL4F PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPG-ETTPQPSELGSS 666 L +++ + P +Y + T+ +C+VCL +++ +E L+ +P C H FH ECID WL SHTTCP+CR +L +P + + Q E+ SS Sbjct: 73 LSKDIREMLPIVIYKESFTVN----DTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSS 160
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14 Identity = 27/45 (60.00%), Postives = 40/45 (88.89%), Query Frame = 1 Query: 475 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRS 609 +C+VCL+EF+++E+LRL+PKC+H FH CID WL+SH+ CP+CR+ Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL1G_ARATH (RING-H2 finger protein ATL1G OS=Arabidopsis thaliana GN=ATL1G PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 41/129 (31.78%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 292 FFSIYIRHCSDSSNSVIXXXXXXXXXXXXXXXXXLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL---ASEPGETTPQPSELGSSE 669 F+ IY+R S +S+ L +E+ + P V+ + T+ +C+VCL +++ ++ L+ IP C H FH +CID WL SHTTCP+CR L S + P PS + E Sbjct: 42 FYLIYLRRSSSDLSSLGMRTTFIPGNSLSTIELGLSKELREMLPIVVFKESFTVMDS----QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDE 166
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5M_ARATH (RING-H2 finger protein ATL5M OS=Arabidopsis thaliana GN=ATL5M PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 415 TFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGET 636 T PT VYS L++ ECA+CL+EFE E+++++ KC H FH +CI WL + ++CP CR+++ S+ ET Sbjct: 88 TTPTLVYSS--DLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHSET 159
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL3K_ARATH (RING-H2 finger protein ATL3K OS=Arabidopsis thaliana GN=ATL3K PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYS-DVKTLKVGKGALE-------CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSEL 657 LD VI+++P F ++ D+ + G G + C++CL E+ ++E LR++P+C H FH C+DAWL+ + +CPVCR++ P ++TPQ + L Sbjct: 100 LDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTP-QSTPQSTPL 194
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5E_ARATH (Putative RING-H2 finger protein ATL5E OS=Arabidopsis thaliana GN=ATL5E PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGS 663 LDR VI+++P V D + L C++CL ++E E +R IP+C+H FH +C+D WL + TCP+CR+ +P PS L + Sbjct: 67 LDRPVIESYPRIVLGDSRRLPRPNNG-PCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRN---------SPAPSRLAT 146
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL5B_ARATH (RING-H2 finger protein ATL5B OS=Arabidopsis thaliana GN=ATL5B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 615 + + + P YS +K A EC +CL +F + ET+R++PKC+H FH +CID WL SH++CP CR +L Sbjct: 89 IKKRALKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
BLAST of FC875266 vs. ExPASy Swiss-Prot
Match: ATL2L_ARATH (RING-H2 finger protein ATL2L OS=Arabidopsis thaliana GN=ATL2L PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 394 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSE 654 L+ VI + PTF T V A ECAVCL+ ++ + R +P C H+FH +C+D WL + +TCPVCR+ + P P+P E Sbjct: 82 LNPTVIASLPTFTVG--ATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRP-RLEPEPRE 165 The following BLAST results are available for this feature:
BLAST of FC875266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875266 ID=FC875266; Name=FC875266; organism=Citrus clementina; type=EST; length=673bpback to top |