FC875276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_THEAC (50S ribosomal protein L15e OS=Thermoplasma acidophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 78/190 (41.05%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 58 GAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 G Y V E W+ + + L + R E+R PSIVR+ PTR D+AR LG+K+K I+ G+ P +L ++S + +AEERA K + VLNSY++ ED YKYFEVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS R+ Sbjct: 5 GLYQAVREEWKSLKKSEIYDLVKKRMIEWRHGPSIVRLEHPTRIDRARALGFKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRMAYNKLTRKKSLKLIAEERAADKYPNMEVLNSYYVGEDGLYKYFEVILVDRSHPNIFNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRS 191
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_METS5 (50S ribosomal protein L15e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl15e PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 78/197 (39.59%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 61 AYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHK-ARPSRRATWKR 636 AY+F++ W ++ + + R R E+R ++ R+ +PTR D+AR LGYKAKQ +P GV +S + +AEE+A RK GL VL SY++ ED YKY+EVILVDP + I +DP+ NWL NP ++ R RGLTSAG++ RGL RG KG +H+K AR + K+ Sbjct: 5 AYSFMASTWASEEWK--KTVIRQRLVEWRNQNTVTRIEKPTRLDRARALGYKAKQGIIVARVKVEKGGMDKQRPNS--GRRPKRMGVYGFSPAKSLQFIAEEKAARKFPGLEVLGSYYVAEDGKYKYYEVILVDPHNPVIMSDPQFNWLKNPANRGRVFRGLTSAGRRTRGLLKSRGLKGTIHYKIARKKKEREQKK 197
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29 Identity = 73/188 (38.83%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 64 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 Y +V + W+ + L+ R +R+ S+ R+ RPTR D+AR LGYKAKQ G+ T + G ++ S + +AE RA RK L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+ + R RG TSAG+K RG+ +G K RPS RA Sbjct: 6 YGYVRDAWKNPDETYVNELRWERLQVWRKQGSVTRIERPTRIDRARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRA 190
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29 Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLR 579 + Y ++ W ++ QR+ W R+ PSIVR+ +PTR ++AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+E+++VDP+H I++DP+ WL +P +++R RGLTSAGKK RGLR Sbjct: 3 LSMYHYIENTWNSEEWKKSVLRQRLIKW--RKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLR 173
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28 Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 64 YTFVSELW-RKKQSDVMRFL-QRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 Y +V E W R +SDV L R++ W R+ S+ R+ RPTR D+AR LGYKAKQ + + G +S + +AEERA + + VLNSYW+ +D KY+EVILVD H +I++D + WL NP H+ R RG TSAG+K RG+R +G K RPS R+ Sbjct: 6 YAYVREAWARPDKSDVKALLWDRMQVW--RREGSVTRIDRPTRIDRARALGYKAKQGIAVVRVHVRRGGRRASRY--VRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVILVDGHHPSIQSDKNLAWLANPTHRGRAERGKTSAGRKGRGMRTRGRGTEKTRPSIRS 190
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_SULAC (50S ribosomal protein L15e OS=Sulfolobus acidocaldarius GN=rpl15e PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.934e-28 Identity = 76/193 (39.38%), Postives = 106/193 (54.92%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHKARPSRR 621 + Y ++ + W+ K D R + R R E+R+ P+I R+ RPTR ++AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+EVI+VD +H IR+DP + WL + V++ R RGLTSAG+K RGL RG KG + K + ++ Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGTVQRKWKKKQK 191
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_THEVO (50S ribosomal protein L15e OS=Thermoplasma volcanium GN=rpl15e PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.300e-28 Identity = 75/188 (39.89%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 64 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 624 Y + E W+ + + +++ R +R PS+VR+ PTR D+AR LGYK+K I+ G+ P +L ++S + +AEERA K L VLNSY++ ED YKY+EVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS RA Sbjct: 7 YQEIREEWKSLKKSEIYDVEKSRMIGWRHGPSVVRLDHPTRIDRARALGYKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRLAYNKLTRKKSLKLIAEERAADKYPNLEVLNSYYVGEDGLYKYYEVILVDKSHPNIYNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRA 191
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28 Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = 1 Query: 55 MGAYTFVSELWRK-KQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHL-HHKARPSRRA 624 + +Y+ + + W+K K+SD+ +Q+ R +R+ S+VR+ PTR D+AR LGYKAKQ I+ G+ P +L ++S + +AEERA K + VLNSY++ ED YKY+EVIL+D + A+ +D ++W+ N +K R RGLTSAG K RGL G G L K+RPS RA Sbjct: 2 LSSYSMIRDSWKKLKKSDIYP-VQKARMVSWRKSGSVVRLDYPTRLDRARSLGYKAKQGFIIVRSRVRKGGQHRPK---IMGGRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGL-GHGRLGSAKSRPSIRA 189
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_NANEQ (50S ribosomal protein L15e OS=Nanoarchaeum equitans GN=rpl15e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23 Identity = 71/193 (36.79%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 55 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 633 MG Y +V L+ K + + L + R ++R+ P IV V RPTR D+AR LGYK I G+ + + +AEERA R + VL SYW+ ED YK++EVILVDP + I N P WL + R RG TS+ +K+RGLR G K RPS+RA +K Sbjct: 1 MGLYQYVRALY-KDPKEFLGELYKQRIQQWRREPPIVEVERPTRIDRARALGYKP---LPGIKIVRVRVRKGTRKREEIKGGRRPKAEYRIRPLGVNLQWIAEERANRLHRNMEVLGSYWVGEDGLYKWYEVILVDPFNPNIYNRPEYVWLLQKNQRGRVFRGKTSSARKFRGLRNGGLGAEKVRPSKRANFK 189
BLAST of FC875276 vs. ExPASy Swiss-Prot
Match: RL15E_METLZ (50S ribosomal protein L15e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl15e PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23 Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 64 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 615 Y +V + W+K ++ L R +R+ ++VR+ RPTR D+AR LGYKAKQ + G+ TN+ G+ + ++ +S+AEERA + + VLNSYW+ +D KY+EVILVD ++ D + W+ + + R RG TSAG++ RGL +G K RPS Sbjct: 6 YGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRY---IRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADT--RGRVFRGKTSAGRRARGLHNRGTGTEKCRPS 185 The following BLAST results are available for this feature:
BLAST of FC875276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875276 ID=FC875276; Name=FC875276; organism=Citrus clementina; type=EST; length=689bpback to top |