FC875287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37 Identity = 88/226 (38.94%), Postives = 119/226 (52.65%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIF-----DRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARY 667 FGTRLP + SY ++ SII + RF+ Y+ DP E+F RTMR+IQG+LI+ Q+++ F G+WRN+ RF G GLY GFP ++K+G I+ DR+ ++ + +VW++A LLT G Y+ TQ SCRTDR GLI P P+FD ++FAMM ASFV L ESTG F+A ARY Sbjct: 109 FGTRLPVIASASYAYIIPITSIIYSTRFTYYT-DPFERFVRTMRSIQGALIITGCFQVLVCFLGVWRNIVRFLSPLSIAPLVTFTGLGLYHIGFP-------------------------LVKKGPMIWDGNRCDRYGMMLCIPVVWLFAQLLTSSGVYDHKPQTTQTSCRTDRTGLITNTP-----------CPTFDITDSFAMMAASFVTLFESTGLFYASARY 297
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.738e-37 Identity = 84/242 (34.71%), Postives = 124/242 (51.24%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN---------------DAAPK---TQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASA 676 FGTRLP V G S+ ++ + +I + F N + KF+ TMR +QG++IV S Q +LGFSGL + RF G + +GFP CVEI +P +++++ + YL V G +F +AV S +++W YA LTVGGAY+ D K T CRTD + A W+R+P+PFQWG P+F + M+ S VA V+S G + + + +A Sbjct: 242 FGTRLPLVQGSSFVYLAPVLVVINSEEFRNLTE---HKFRDTMRELQGAIIVGSLFQCILGFSGLMSLLLRFINPVVVAPTVAAVGLAFFSYGFPQAGTCVEISVPLILLLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYDYRGCNADIPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVSLVASVDSVGTYHSASMIVNA 480
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35 Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGA--YNDAAPKTQAS----------------CRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 FG+RLP + G S+ F+ ++II + F +G+ FK MR +QG++I+ S Q VLG+SGL + R G Y +GFP V KC+EIG+ Q+++++ + YL + IF +AV S+ I W A LLT GA Y P S CR D + + +APW R P+P QWG P F+ AF M + S +A V+S G++ A + ++ P Sbjct: 236 FGSRLPLIQGPSFVFLAPALAIINSPEFQGLNGN--NNFKHIMRELQGAIIIGSAFQAVLGYSGLMSLILRLVNPVVVAPTVAAVGLSFYSYGFPLVGKCLEIGVVQILLVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFLLTETGAYTYKGCDPNVPVSNVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGVPLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRP 477
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 63/251 (25.10%), Postives = 114/251 (45.42%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGD-----------PVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQY-----LPHVIKRGKN--------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 FG RLP ++ F+ +I+ ++ + D + +R IQG++I++S +++V+GF GL + ++ G ++ K I + + +++ SQY LP I + K +F F +I ++++ W+ + TV + + K RTD R G++ APW +VP+PFQWG P+ A M+ A +++ES G ++A AR + A P Sbjct: 157 FGCRLPLFQASAFAFLAPARAILSLEKWKCNTTDLSITNGTELLHTEHIWYPRIREIQGAIIMSSLIEVVIGFLGLPGALLKYIGPLTITPTVSLIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKLPLPIYKSKKGWTAYKLQLFKMFPIIMAILVSWLLCFIFTVTDVFPPDSSKYGYYARTDARQGVLTVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPP 407
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 61/250 (24.40%), Postives = 116/250 (46.40%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRF---------SNYSGDPVEK-FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHV--------IKRG-----KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 FG RLP ++ F+ +I+ ++ +N + + +E + ++ IQG++I++S +++V+G GL + R+ G ++ K I + + +++ SQY +V K+G +F F +I ++++ W+ + TV + + RTD R G++ APW +VP+PFQWG P+ A M+ A +++ES G ++A AR + A P Sbjct: 157 FGCRLPLFQASAFAFLAPARAILSLDKWKCNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPP 406
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 61/250 (24.40%), Postives = 116/250 (46.40%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRF---------SNYSGDPVEK-FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHV-----IKRGKN--------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 FG RLP ++ F+ +I+ ++ +N + + +E + ++ IQG++I++S +++V+G GL + R+ G ++ K I + + +++ SQY +V I + K +F F +I ++++ W+ + TV + + RTD R G++ APW +VP+PFQWG P+ A M+ A +++ES G ++A AR + A P Sbjct: 158 FGCRLPLFQASAFAFLAPARAILSLDKWKCNTTEITVANGTAELLEHIWHPRIQEIQGAIIMSSLIEVVIGLLGLPGALLRYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKFQLFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPP 407
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 62/252 (24.60%), Postives = 114/252 (45.24%), Query Frame = 2 Query: 5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDP-----VEKFKRT-------MRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHV--------IKRG-----KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 FG RLP ++ F+ +I+ ++ + D + T +R IQG++I++S +++V+G GL + ++ G ++ K I + + +++ SQY +V K+G +F F +I ++++ W+ + TV + + K RTD R G++ APW +VP+PFQWG P+ A M+ A +++ES G ++A AR + A P Sbjct: 158 FGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTAELLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPP 409
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18 Identity = 64/250 (25.60%), Postives = 111/250 (44.40%), Query Frame = 2 Query: 8 GTRLPAVMGGSYTFVPSTISIILAGR---------FSNYSG--DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 G RLP ++ F+ +I+ R + N+S + + +R +QG+++V+S +++V+G GL + + G +++ I +++I+ SQYL + V + GK IF F ++ +++ VW+ ++LT+ RTD G I A APWIR+P+P QWG P+ A M A+ ++ES G ++A AR A A P Sbjct: 101 GIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSLPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPP 350
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17 Identity = 63/250 (25.20%), Postives = 109/250 (43.60%), Query Frame = 2 Query: 8 GTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPV-----------EKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 G RLP ++ F+ SI+ R+ S + + + +R +QG+++V+S +++V+G GL + + G +++ I +++IV SQYL + V + GK IF F ++ +++ VW+ ++LT+ RTD G I A +PWIR+P+P QWG P+ M A+ ++ES G ++A AR A A P Sbjct: 108 GIRLPLFQASAFAFLVPAKSILALERWKCPSEEEIYGNWSMPLNTSHIWHPRIREVQGAIMVSSMVEVVIGLMGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRVQIFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPP 357
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 63/250 (25.20%), Postives = 110/250 (44.00%), Query Frame = 2 Query: 8 GTRLPAVMGGSYTFVPSTISIILAGR---------FSNYSG--DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682 G RLP ++ F+ +I+ R + N+S + + +R +QG+++V+S +++V+G GL + + G +++ I +++IV SQYL + V + GK IF F ++ +++ VW+ ++LT+ RTD G I A +PWIR+P+P QWG P+ M A+ ++ES G ++A AR A A P Sbjct: 108 GIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSMPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRIQIFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPP 357 The following BLAST results are available for this feature:
BLAST of FC875287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875287 ID=FC875287; Name=FC875287; organism=Citrus clementina; type=EST; length=693bpback to top |