FC875289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.394e-37 Identity = 81/173 (46.82%), Postives = 100/173 (57.80%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + TD +SFK+AIWFWMT Q KPS H+VI W Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNQNNYEKA--GNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSW 184
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.056e-37 Identity = 80/173 (46.24%), Postives = 100/173 (57.80%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQPPKPSCHEVITDEW 696 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + TD +SFK+AIWFWMT Q KPS H+VI W Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNRNNYEKA--GTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRW 184
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.857e-36 Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 1 Query: 109 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEW 696 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY TDP ++FK+A+W WMTA+ P +PS H V+T +W Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQW 265
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.857e-36 Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 1 Query: 109 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEW 696 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY TDP ++FK+A+W WMTA+ P +PS H V+T +W Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQW 265
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33 Identity = 75/174 (43.10%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWN 699 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +R RE+AAF AQT HETTGGW AP G Y G Y+GRGPIQ+++NYNY T+D + FK+A+WFWMT Q PKPS H+VIT W+ Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG-------------------STSDYFGRGPIQISYNYNY--GAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWS 145
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27 Identity = 65/182 (35.71%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 151 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEIS-PPSPYC-NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQPPKPSCHEVI 684 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ R RE+AAF A T+G D +AWG C I+ + + +C + ++PC KY RGPIQLT N+NY DP++SFK+A+WFWM+ KPSCH+++ Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIV 297
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 67/181 (37.02%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC---NLNYPC-RGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFW 642 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ REIAAFFA HET +C+I EI PS YC + +PC GK YYGRGP+Q++WN+NY PVL+F++A+W+W Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 62/180 (34.44%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 121 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWM 645 G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E REIAAFFA HET +C+ISEI+ + YC N +PC KYYGRGP+Q++WNYNY D V++FK+A+WFWM Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 61/188 (32.45%), Postives = 87/188 (46.28%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN---LNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTA 651 CG G G +G G G + +++ F + C + FYT AF+ A K +P F + G++ REIAAFFA HET +C+ISEI+ + YC+ +PC KYYGRGP+Q++WNYNY D V++FK+A+WFWM + Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215
BLAST of FC875289 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 68/191 (35.60%), Postives = 93/191 (48.69%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYC---NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXTTDPVLSFKSAIWFWMTAQPP 660 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + REIA FA HET +C+I EI+ S YC N YPC GK Y+GRGPIQL+WNYNY C +++P ++F++ +WFWM + P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218 The following BLAST results are available for this feature:
BLAST of FC875289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875289 ID=FC875289; Name=FC875289; organism=Citrus clementina; type=EST; length=704bpback to top |