FC875293

Overview
NameFC875293
Unique NameFC875293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 72/183 (39.34%), Postives = 101/183 (55.19%), Query Frame = 2
Query:  140 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 688
            G  + FY  TCP+AE I+R  V   +      A   LR  FHDC VQ CD S+L+       +E+    +  ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C    +RL+
Sbjct:   34 GTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN---TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLF 212          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 64/183 (34.97%), Postives = 109/183 (59.56%), Query Frame = 2
Query:  140 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR 682
            GL  ++Y+ TCP+ E+I+R  +  ++     +  + LR +FHDC VQ CDAS+LL+  R +  +E +  ++FG+R    + +IK ++E ECP  VSC+D+++L+ RD V   GGP I +  GR+D   + ++ + +  LP     +   L  FA  G+     VA++G+H++G THC  ++ R
Sbjct:   37 GLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSR 219          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 77/183 (42.08%), Postives = 104/183 (56.83%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV-VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 685
            L MNFY ++CP AEDI+R+ V    + +++ A   LR  +HDC V+ CDASLLLDS   K +SEKE   +  +  F  I+ IK  +E+ CP  VSCADIL L+ RD V      P   + TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRL 228          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.810e-29
Identity = 72/182 (39.56%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 688
            L +N+Y   CP  E I+  +V+   K   +   + LR IFHDC V  CDAS+LLD      +E+    S  +R F  I++IK  +E+ CPG VSCADIL  + R   V LGGPY P   GRRD + S A  +E+ +P     ++ +LE F + G++   LV L G+H++G+  C  +  RLY
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEG---TERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLY 228          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.810e-29
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  152 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG-RKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 688
            +FY D+CP     +R  V+    + +  A S LR  FHDC V  CDAS+LLD TR  L EK     +  +R +  I+ IK  VER CPGVVSCADIL ++ RD V+ +GG    +K GRRD    S +      LP    ++  ++  F A G+    +VAL G+H++G+  CV    R+Y
Sbjct:   33 DFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIY 213          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.810e-29
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 2
Query:  155 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 688
            FY  TC  A   IR  ++    R +  A S +R  FHDC V  CDAS++L +T    SE++   +F   R F  I+  K AVE  CPGVVSCADI+ ++ RD    +GGP   +K GRRD   +   I ++ LP+   S++ + E F   G++   LVAL G+H++G+  C+    RLY
Sbjct:   25 FYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLY 203          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 75/174 (43.10%), Postives = 99/174 (56.90%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 664
            L + FY  +CPQAE I+R  V+  +        + LR  FHDC V+ CDASLL+DST    SEK    +  +R F  I+ IK  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDGR S    L+  LP    S+S  +  F   G++    VALLG+H+VG+ +C
Sbjct:   24 LRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNC 192          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 67/183 (36.61%), Postives = 105/183 (57.38%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 685
            L  NFY  TCP+  DIIR+ +      +  TA + +R  FHDC    CDAS+L+ ST    +E++   +  +    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV 203          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 74/186 (39.78%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 688
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G  HC K   R+Y
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIY 206          
BLAST of FC875293 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 65/185 (35.14%), Postives = 107/185 (57.84%), Query Frame = 2
Query:  143 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP 691
            L ++FY  +CP+  DIIRE +         TA + LR  FHDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNP 216          
The following BLAST results are available for this feature:
BLAST of FC875293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER71_ARATH1.386e-2939.34Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER29_ARATH1.386e-2934.97Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER24_ARATH1.386e-2942.08Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER7_ARATH1.810e-2939.56Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER68_ARATH1.810e-2939.78Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER4_ARATH1.810e-2939.11Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER57_ARATH2.364e-2943.10Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER31_ARATH2.364e-2936.61Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER16_ARATH3.087e-2939.78Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER63_ARATH5.266e-2935.14Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31402D01EF CTVClemen1 Citrus clementina cDNA clone C31402D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875293 ID=FC875293; Name=FC875293; organism=Citrus clementina; type=EST; length=700bp
GAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGG
GTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTG
TCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTAT
GAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAAC
AAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTT
AGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCT
TCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCT
TTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAA
AGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGG
TAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAG
GAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTC
CCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCAT
TGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTGACC
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