FC875296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 35 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAK 583 + + HE+ V ++ + P+ E ++++GS D T+K+ + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + SG D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIGFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR69_HUMAN (WD repeat-containing protein 69 OS=Homo sapiens GN=WDR69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 53/192 (27.60%), Postives = 85/192 (44.27%), Query Frame = 2 Query: 104 LLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 L+ TGS+D T KL + + T GH ++S++ + SG + S D V V+D DT + L +E+ F+ +L + G + KLWD +ATL+ E +L + G+ IA+ S DGT +F K + LEGH + + ++P +L +SD T Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE-------------ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKT 368
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: YH92_CAEEL (Uncharacterized WD repeat-containing protein ZC302.2 OS=Caenorhabditis elegans GN=ZC302.2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 55/196 (28.06%), Postives = 96/196 (48.98%), Query Frame = 2 Query: 113 TGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 TGS D+ +K+ DM +T H LG+ + + ASAS D+ V++FDV + A + T+ + V+ F+P+ + +A A G +V++WD T + + P P + S++++ DG +A+ S DG I V+D L L + PV + +SP + + L SA D+ + ++D Sbjct: 230 TGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASA-GFDETVRVWDFKTGLCVKCI----PAHSDP---------ITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSP-NGKYLLSAQLDSSLKLWD 410
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: WDR69_MACFA (WD repeat-containing protein 69 OS=Macaca fascicularis GN=WDR69 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 53/192 (27.60%), Postives = 85/192 (44.27%), Query Frame = 2 Query: 104 LLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 679 L+ TGS+D T KL + + T GH ++S++ + SG + S D V V+D DT + L +E+ F+ +L + G + LWD +ATL+ E +L + G+ IA+ S DGT +F K + LEGH + + ++P R+L +SD T Sbjct: 191 LVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFN-WDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDE-------------ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKT 368
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 53/200 (26.50%), Postives = 98/200 (49.00%), Query Frame = 2 Query: 98 PALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK--PTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 691 P L+ TGS D TVKL +T + V++V + + S +D+ ++V+D+ N T+ V + +G+ L ++ +V++WD + P+ +K + + +K +L +WSPDG +IA+GS D ++ V+D T + L+ L GH + + + P +P ++ SAS D ++M Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRPF-------APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IIISASSDKRLYM 353
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 57/175 (32.57%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 173 TNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 T H V +A HP+ + ASAS D+ V+++D + TL+ V + FDP+G +A ++KLWDTA + L D S V SV + PDG + S S D TI V+ V+ + GH VR V S D R L SAS+D ++D Sbjct: 100 TLASHRAPVTRLAFHPTWTLLASASEDATVKLWDWEAGDMERTLKGHTKAVMDVDFDPRGGLMATC-SSDLTLKLWDTAN-------QYTNVKTLHGHDHS-----VSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSE-DGRWLVSASNDQTSRIWD 260
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 191 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVT--RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 L + SV P G A+ + D +RV+D+ + T +++ + F G T+A +G G +V+LWD T + LSI + V +VA SPD + +A+GS+D ++ V+D+ A+ L +GH V S+ +SP D R L S S D + M++ Sbjct: 345 LYIRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIA-SGSGDRTVRLWDIETGQNTSVLSI--------------EDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSP-DGRNLVSGSLDKTIKMWE 499
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: PRP19_CAEEL (Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 56/208 (26.92%), Postives = 97/208 (46.63%), Query Frame = 2 Query: 77 VPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGL-KPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 + A + + L LTG +D+TV L + Q+ +T GH + +V HP I A SAS DS +RV+ ++S A ++ + V T +++ G + D + W A I + L K + + S+ V S+ + PDG +G+ D + ++D+ GH VRS+ +S + L + S+D V ++D Sbjct: 214 ITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPV---------TDISLNASGDYILSASDDSYW---AFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSE-NGYYLATGSEDGEVKLWD 408
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 38 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVT 574 E+ H + V V + P + P ++ G D TVK+ + +L+ + GH + +V P G + S DS ++D++ ++ TLE + + F P L VA G S+K+WD A + L RPE + PT K+ + LS+AWS DG+ + +G D TI V+ V+ Sbjct: 145 EDGHTDWVSCVRFSP-NHSNPIIVSCG-WDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYG--PSIKIWDLACKKTVEEL---RPEVVSPTSKADQPQ-CLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
BLAST of FC875296 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 54/217 (24.88%), Postives = 97/217 (44.70%), Query Frame = 2 Query: 47 HEESVWAVTWVPATETRPALLLTGSLDETVKLGRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIASGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 697 H + +VT+ + L+ G+ T+KL ++ ++ RT TGH +SV HP G AS SLD+ ++++D+ I T + V ++F P G + V+GG VK+WD L+ T+ S + + S+ + P +A+GS D T+ +D+ + + VR L ++P VL + + ++ Sbjct: 58 HSSGIDSVTF----DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWV-VSGGEDNIVKVWDLTAGKLL-------------TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256 The following BLAST results are available for this feature:
BLAST of FC875296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875296 ID=FC875296; Name=FC875296; organism=Citrus clementina; type=EST; length=699bpback to top |