FC875301

Overview
NameFC875301
Unique NameFC875301
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15382 contig Ccv1_Contig15382:10..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875301 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16
Identity = 61/187 (32.62%), Postives = 95/187 (50.80%), Query Frame = 2
Query:   86 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLLAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFR-YDGGDVNMMLARTEAKIIRDK-ISDKDYAHEELIRILTTRS 640
            A  DA  +  A +  G +E  I+++L +R+ AQR+ I   Y     ++L  A+   LS   E  +L    TPA+ DA     + K L +    L+EI C+R++++L    + Y   YK  LE+D+   TSG+FRKLLV L    R  DG  ++  L   +A+ + D  +  K     + I I+T RS
Sbjct:   35 AERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELPSAMKSALSGHLETVMLGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGEFRKLLVALAKGKRAEDGSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERS 221          
BLAST of FC875301 vs. ExPASy Swiss-Prot
Match: ANX2B_XENLA (Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 54/166 (32.53%), Postives = 89/166 (53.61%), Query Frame = 2
Query:   41 KSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLLAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDV 538
            +S + ++K  T    A +DA  +  A +  G +E  II++L +R+  QR+ I   ++    +DL  AL   LS + E  +L    T  + DA     + K L +    L+EI C+R++++LL  + AY   +K  LE+D+   TSGDFRKL+V L    R + G++
Sbjct:   22 QSKLGSVKAATHF-DAEKDAAAIETAIKTKGVDELTIINILTNRSNEQRQDIAFAFHRRTKKDLPSALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELFKTELEKDIMSDTSGDFRKLMVALAKGRRQEDGNM 186          
BLAST of FC875301 vs. ExPASy Swiss-Prot
Match: ANX10_DROME (Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   86 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLLAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGD 535
            A++DA+ L  A +G+GT+E  II VL  R+  QR+ I+ +Y   +  DL+  L  EL   FE  ++   + P E      + A   + +    L+EI CT+++ ++      Y  RY++ L E +   TSG FR+LL  +V+  R DG D
Sbjct:   17 ASQDAQVLRAAMKGFGTDEQEIIDVLVGRSNQQRQTIKAVYEAEFERDLVDDLKDELGGKFEDVIVGLMMPPVEYLCKQLHAAMAGIGTEEATLVEILCTKTNEEMAQIVAVYEERYQRPLAEQMCSETSGFFRRLLTLIVTGVR-DGLD 165          
BLAST of FC875301 vs. ExPASy Swiss-Prot
Match: ANXA1_RODSP (Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 54/192 (28.12%), Postives = 87/192 (45.31%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLLAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKIIRDKISDKDYAHEELIRILTTRSK 643
            P+  PS+  D   LHK     G +EA I+ +L  R  AQR  ++ +Y +  GE L + L K L+   +  +L    TPA+ D      A K + +    L+EI  TRS++ +      Y    KK + +     TSG+FR  L+ L    R +   VN  +A T+A+ +      ++     +   + T  K
Sbjct:   40 PSFDPSS--DVAALHKGIMVNGVDEATILDLLTKRYNAQRHHLKAVYIQETGEPLDETLKKALTGHIQELLLAMIKTPAQFDGNELRAAMKAVGTDEETLIEILWTRSNQQIREITSVYREELKKDIAKYQTSDTSGEFRDALLALAKGNRCEDMSVNQDIADTDARALYQAAERRNGTDVNVFNTILTTKK 229          
BLAST of FC875301 vs. ExPASy Swiss-Prot
Match: ANXA9_MOUSE (Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = 2
Query:    8 SSFSILQKR*NKSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLLAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPL 505
            SS  +  K     T+ TL+      S  +D ++L KA  G G +   I+ VL +R+  QR+LI   + E   +DLLK+L   LS + E+ V+      A+ DA     A K   S+  V +EI  TR++  L A    Y   ++   EED+   T+G  + LL+ L
Sbjct:   18 SSLGLADKTAAWGTLGTLRTFLSF-SVDKDVQRLLKAIAGQGVDYDTIVDVLTNRSREQRQLISRAFQERTKQDLLKSLQAALSGNLEKIVVALLQPAAQFDAQELRTALKTSGSAEDVALEILATRAAPGLQACLAVYKHDFQVEAEEDIRTETNGILQDLLLAL 182          
The following BLAST results are available for this feature:
BLAST of FC875301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA2_RAT2.922e-1632.62Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANX2B_XENLA1.110e-1532.53Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=... [more]
ANX10_DROME1.110e-1533.33Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=... [more]
ANXA1_RODSP4.665e-1428.13Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3[more]
ANXA9_MOUSE6.737e-1331.93Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC31402D10EF CTVClemen1 Citrus clementina cDNA clone C31402D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875301 ID=FC875301; Name=FC875301; organism=Citrus clementina; type=EST; length=692bp
GACTGCCTCGTCATTTTCTATTTTACAAAAACGCTGAAACAAATCGACAA
TGGCGACCCTTAAAGTGCCAACCCAGACCCCTTCTGCTGCTGAGGATGCT
GAGCAACTCCACAAAGCCTTCCAAGGATGGGGCACGAATGAGGCCCTCAT
TATATCTGTCTTGGCTCACAGAAATGCAGCTCAGCGCAAGTTGATTCGAG
AAATCTACAACGAAACTTATGGGGAAGACCTTCTTAAAGCACTGGACAAA
GAACTTTCAAGTGACTTTGAGAGATCTGTACTGCTATGGACATTGACTCC
TGCTGAGCGTGATGCTTATTTGGCAAATGAAGCGACAAAGAGATTGACTT
CAAGCAACTGGGTTCTCATGGAAATTGCCTGTACTAGATCTTCAAGAGAC
CTACTTGCTGCAAAGCAGGCCTACCATGCTCGTTACAAGAAATCCCTAGA
GGAAGATGTTGCATATCACACATCTGGGGACTTCCGCAAGCTTTTGGTTC
CTCTTGTGAGCACATTTCGATATGATGGAGGAGATGTGAACATGATGTTG
GCAAGAACTGAGGCTAAGATTATCCGTGACAAGATTTCAGACAAGGATTA
TGCTCATGAGGAGCTTATCAGGATTCTGACTACAAGGAGCAAGGCACAGA
TAAATGCGACCCTCAAATCACTACATGATGCTTTTGGAAATG
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