FC875302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RB39A_MOUSE (Ras-related protein Rab-39A OS=Mus musculus GN=Rab39 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 92 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFGKKY----EPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDV-KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 586 +T+ F+L+++GD GK+ + R G F + +PT+GV+ GK I+ WDTAGQE+F + YY + ++FD+T R ++++V W + + IV L G+K D+ RQV ++ ++Y E SAK N E+ F L R + Sbjct: 2 ETIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLHSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVSREEAERLSTDCGMKYIETSAKDATNVEESFTILTRDI 175
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RB39A_HUMAN (Ras-related protein Rab-39A OS=Homo sapiens GN=RAB39 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 52/174 (29.89%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 92 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEF----GKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDV-KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 586 +T+ F+L+++GD GK+ + R G F +PT+GV+ GK I+ WDTAGQE+F + YY + ++FD+T R ++++V W + + IV L G+K D+ RQV ++ ++Y E SAK N E+ F L R + Sbjct: 2 ETIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRIVFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDI 175
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL-AGDPNL 604 K+ ++GD G GK++ V R + F PTIG +F WDTAGQE+F L YY AII++D+T T+ + W ++L + NI + + GNK D + R+V + + + + E SAK+ N + F+ ++R++ + D NL Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANL 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 2 Query: 77 ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKS-NYNFEKPFLYLAR 580 A+P++ + P++KLV+VGDGG GK+ + F Y+PTI N I DTAGQE+F +R+ Y G +I++ VT + ++++V +H+ + RV E+ P++L NKVD+ + R+V Q K N+ Y E SAK N +K F L R Sbjct: 5 AVPSE---NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVR 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAS1_YEAST (Ras-like protein 1 OS=Saccharomyces cerevisiae GN=RAS1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 49/165 (29.70%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN--IPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 595 +K+V+VG GG GK+ + + F +Y+PTI + I DTAGQE++ +R+ Y G+ ++++ VT+R ++ + ++++ + RV ++ IP+V+ GNK+D++N RQV + + ++ N + E SAK N ++ F L R + D Sbjct: 11 YKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSI-LDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQLNAPFLETSAKQAINVDEAFYSLIRLVRDD 174
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RALB_MOUSE (Ras-related protein Ral-B OS=Mus musculus GN=Ralb PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC---ENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 586 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ +++F +T ++ + + RV + IP+++ GNK D+ + RQV + ++ +QY E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKSEEDKIPLLVVGNKSDLEERRQVPVDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREI 176
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB36_HUMAN (Ras-related protein Rab-36 OS=Homo sapiens GN=RAB36 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 56/170 (32.94%), Postives = 78/170 (45.88%), Query Frame = 2 Query: 86 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVKN----RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLA 577 N TV K+V+VGD GKT+ + R F + Y+ TIGV+ F WDTAGQEKF + YY Q I FD+T T ++ W D R E + I L G K D+ + Q +A V R+ +Y+ +SAK+ N + F +A Sbjct: 115 NTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVA 284
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 53/165 (32.12%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTN---CGKI--RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 586 K+ ++GD G GK++ V R + F PTIG F T CG +F WDTAGQE+F L YY A+I++D+T + ++ + W ++L ENI + + GNK D+ + R+V K + + E SAK+ N E+ F ++R++ Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGAS-----FMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: YPT4_SCHPO (GTP-binding protein ypt4 OS=Schizosaccharomyces pombe GN=ypt4 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 49/169 (28.99%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 86 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCG----KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN-RQVKAKQVT-FHRKKNL-QYYEISAKSNYNFEKPFL 568 ++++ DY K+V+ G GTGK+ ++R + ++ + T+G++ G +I+ WDTAGQEKF + YY A++++DVT + +++ + +W D+ + I +VL G+K D++N RQV ++ F +K++ +E S+ + N E+ FL Sbjct: 2 DKESYDY-LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFL 169
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAS_CARAU (Ras-like protein (Fragment) OS=Carassius auratus PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 48/161 (29.81%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 586 +KLV+VG GG GK+ + + F +Y+PTI + + + DTAGQE++ +RD Y G+ + +F + +++++ + + RV E++P+VL GNK D+ +R V KQ R + + E SAK+ E F L R++ Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRSVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREI 163 The following BLAST results are available for this feature:
BLAST of FC875302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875302 ID=FC875302; Name=FC875302; organism=Citrus clementina; type=EST; length=744bpback to top |