FC875302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.475e-40 Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 2 Query: 110 SFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGK-IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTFH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQHMK 676 ++K+ ++GDGG GKTT++ R L G F K Y T+G HP+ F + G I+F WDTAGQEK L+D YYI AI FDVT+R+T +N+ W ++ V N PIV+C NK+D+KNRQ +K++ + KN +Y+EISAK+ +NF PFL+LAR G P+L FV + L P EV D + + K Sbjct: 7 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLEPTEVNYDYHSPEESK 199
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_RABIT (Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_RAT (Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_PONAB (Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_MOUSE (Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_HUMAN (Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_CANFA (Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25 Identity = 59/162 (36.42%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_BOVIN (Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.685e-25 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQVKAK--QVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C +++FDVTA T+K + +W + R EN P V+ GNK+D++NRQV K Q + K N+ Y+E SAK N E+ F + R Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVR 171
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB23_HUMAN (Ras-related protein Rab-23 OS=Homo sapiens GN=RAB23 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 110 SFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 628 + K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ V +W + +IP VL NK+D +KN + +A ++ L++Y S K + N + F YLA K E P L Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEA----LAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPEL 183
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.002e-21 Identity = 56/178 (31.46%), Postives = 93/178 (52.25%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNLHFVES 619 FK++++GDGG GK++ + R++T +F + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y+E SAK + N F R++ D + H +++ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQT 185 The following BLAST results are available for this feature:
BLAST of FC875302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875302 ID=FC875302; Name=FC875302; organism=Citrus clementina; type=EST; length=744bpback to top |