FC875302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.002e-21 Identity = 62/191 (32.46%), Postives = 100/191 (52.36%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 640 FK++++GD GKT V R +G F + TIGV+ + N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESPRNSFMLDSKPVLAPPE 206
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21 Identity = 56/178 (31.46%), Postives = 93/178 (52.25%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNLHFVES 619 FK++++GDGG GK++ + R++T +F + TIGVE D + + WDTAGQE+F LR +Y C ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y+E SAK + N F R++ D + H +++ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQT 185
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21 Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 116 KLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-----RVCENIPIVLCGNKVDVKNRQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 580 K++I+GD G GKT+ + +++ +F +Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV T++N+ +W + R +N P V+ GNK+D++N++V K K N+ Y+E SAK N E+ F +AR Sbjct: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLENQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAR 172
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 80 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 565 +P ++ +Y FK+VI+GD GK+ + R EF +K + TIGV+ + I CWDTAGQE+F + GYY A+I++D+T+++++KNV W +L + E +I I++ GNK D++ +R+V K+ F + + E SA ++ N + F Sbjct: 1 MPQEEEAEY-LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSF 164
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 595 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 595 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 595 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 62/191 (32.46%), Postives = 99/191 (51.83%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 640 FK++++GD GKT V R +G F + TIGV+ N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHNESPRNSFILDSKPVLAPPE 206
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21 Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 592 FKLV +GD GKT+ + R + +F Y+PTIG++ + +R WDTAGQE+F L Y AI+++DV+ R T+ N W D+ R N+ IVL GNK D V+ RQV + K+ + + E SAK N+N + F +A L G Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173
BLAST of FC875302 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20 Identity = 57/186 (30.65%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 113 FKLVIVGDGGTGKTTFVKRHLTGEFGKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 661 FKL+++GD G GKT + R F + TIG+++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V KAK R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188 The following BLAST results are available for this feature:
BLAST of FC875302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875302 ID=FC875302; Name=FC875302; organism=Citrus clementina; type=EST; length=744bpback to top |