FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_NEUCR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Neurospora crassa GN=pph-1 PE=3 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 9.385e-79
Identity = 134/164 (81.71%), Postives = 148/164 (90.24%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I  LM CK L+E  V+ LCEKA+E+L +ESNVQPVK PVT+CGDIHGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLVALK+RYP RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL++++IFCLHGGLSP I+ L
Sbjct:   32 IESLMNCKQLAESDVQRLCEKAREVLQDESNVQPVKCPVTVCGDIHGQFHDLMELFKIGGSCPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPNRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIDNQIFCLHGGLSPSIDTL 195
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.731e-78
Identity = 136/164 (82.93%), Postives = 150/164 (91.46%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +C+ LSE QV++LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECRQLSESQVRSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.658e-78
Identity = 133/164 (81.10%), Postives = 150/164 (91.46%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            IS L +CKPLSE +V+ LCEKA+EIL +ESNVQPV+ PVT+CGDIHGQFHDL ELF+IGG CPDTNYLFMGDYVDRG+YSVETVTLLVALKVRY  R+TILRGNHESRQITQVYGFYDECLRKYGN N+WK+FTDLFDY PLTAL+E+++FCLHGGLSP I+ L
Sbjct:   11 ISILKECKPLSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDECLRKYGNPNVWKLFTDLFDYLPLTALIENQVFCLHGGLSPSIDTL 174
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            + QL +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 VEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            + QL +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 VEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            + QL +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 VEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            + QL +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 VEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            + QL +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 VEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
[Close]
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3 
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A1_NEUCR9.385e-7981.71Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AA_CHICK2.731e-7882.93Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_DICDI4.658e-7881.10Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RAT6.083e-7882.32Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT6.083e-7882.32Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE6.083e-7882.32Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN6.083e-7882.32Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN6.083e-7882.32Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RAT6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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