FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.158e-44
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            LSE +++ LC KA+EI + +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P+ NYLF+GDYVDRG  S+E + LL+A K++YP+   ILRGNHE   I ++YGFYDEC R+Y N  +WK FTD F+  P+ A+++ +IF +HGGLSP
Sbjct:   29 LSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSP 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP1_EMENI (Serine/threonine-protein phosphatase PP1 OS=Emericella nidulans GN=bimG PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.512e-44
Identity = 77/150 (51.33%), Postives = 111/150 (74.00%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            L E +++ LC KA+EI + +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P+ NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   I ++YGFYDEC R+Y N  +WK FTD F+  P+ A+++ +IF +HGGLSP
Sbjct:   29 LLESEIRYLCTKAREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFVLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSP 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP11_DROME (Serine/threonine-protein phosphatase alpha-1 isoform OS=Drosophila melanogaster GN=Pp1alpha-96A PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.512e-44
Identity = 85/195 (43.59%), Postives = 125/195 (64.10%), Query Frame = 3
Query:   93 DIPNPDTVIPIRFRIRESKMGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            DI N D++I     +R ++ G N                      LSE ++++LC K++EI + +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P++NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   I ++YGFYDEC R+Y    +WK FTD F+  P+ A+V+ +IFC HGGLSP
Sbjct:    3 DIMNIDSIISRLLEVRGARPGKNVQ--------------------LSESEIRSLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSP 176          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44
Identity = 77/155 (49.68%), Postives = 116/155 (74.84%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            L+E +++ L  +A EI + +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P +NYLF+GDYVDRG  S+ET+ LL+A K++YP+   ILRGNHE   I ++YGFYDEC R+Y N+ +WK FTD F+  P+ A+++ +IFC+HGGLSP ++++
Sbjct:   26 LAEEEIRYLTVQATEIFINQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NSKLWKAFTDCFNCLPVAAIIDEKIFCMHGGLSPDLKNM 179          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44
Identity = 77/153 (50.33%), Postives = 113/153 (73.86%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            ++E +V+ LC K++EI +++  +  +++P+ ICGDIHGQ+ DL  LF+ GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   I ++YGFYDEC R+Y N  +WK FTD F+  P+ A+++ +IFC HGGLSP ++
Sbjct:   29 MTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQ 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.580e-44
Identity = 84/195 (43.08%), Postives = 125/195 (64.10%), Query Frame = 3
Query:   93 DIPNPDTVIPIRFRIRESKMGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            D+ N D++I     +R ++ G N                      LSE +++ LC K++EI + +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P++NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   I ++YGFYDEC R+Y +  +WK FTD F+  P+ A+V+ +IFC HGGLSP
Sbjct:    3 DVMNIDSIISRLLEVRGARPGKNVQ--------------------LSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-SIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSP 176          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP13_DROME (Serine/threonine-protein phosphatase alpha-3 isoform OS=Drosophila melanogaster GN=Pp1-13C PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 78/150 (52.00%), Postives = 111/150 (74.00%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            LSE +++ LC K++EIL+ +  +  +++P+ ICGDIHGQ++DL  LF+ GG  P+ NYLF+GDYVDRG  S+ET+ LL+A K++Y +   +LRGNHE   I ++YGFYDEC R+Y    +WK FTD F+  P+ A+V+ +IFC HGGLSP
Sbjct:   28 LSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLLRLFEYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVVAIVDEKIFCCHGGLSP 176          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.400e-44
Identity = 78/155 (50.32%), Postives = 112/155 (72.26%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            ++E +++ LC  +KE+ + + N+  +++P+ ICGD+HGQF DL  LF+ GG  P  NYLF+GDYVDRG  S+ET+ LL+A KV+Y     +LRGNHE   I +VYGFYDEC R+Y N  +WK FT+ F+  P++AL++ +I C+HGGLSP I+ L
Sbjct:   27 ITETEIRQLCLASKEVFLSQPNLLELEAPIKICGDVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKVKYKFNFFLLRGNHECASINRVYGFYDECKRRY-NVRLWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSL 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.506e-44
Identity = 74/150 (49.33%), Postives = 112/150 (74.67%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            L+E +++ LC  ++EI +++ N+  +++P+ ICGDIHGQ+ DL  LF+ GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+   +LRGNHE   I ++YGFYDEC R++ +  +WK+FTD F+  P+ A+++ +I C+HGGLSP
Sbjct:   36 LNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-SVRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSP 184          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP1_BRAOL (Serine/threonine-protein phosphatase PP1 OS=Brassica oleracea GN=PP1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.865e-43
Identity = 76/150 (50.67%), Postives = 110/150 (73.33%), Query Frame = 3
Query:  228 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            LSE +++ LC  +K+I +++  +  +++P+ ICGDIHGQ+ DL  LF+ GG  PD NYLF+GDYVDRG  S+ET+  L+A K++YP+   +LRGNHE   I ++YGFYDEC R++ N  +WKIFTD F+  P+ AL++  I C+HGG+SP
Sbjct:   45 LSEGEIRQLCAVSKDIFLQQPILLELEAPIKICGDIHGQYSDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICFLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID-RILCMHGGISP 192          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP11_SCHPO1.158e-4452.00Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
PP1_EMENI1.512e-4451.33Serine/threonine-protein phosphatase PP1 OS=Emeric... [more]
PP11_DROME1.512e-4443.59Serine/threonine-protein phosphatase alpha-1 isofo... [more]
PP1_DICDI1.975e-4449.68Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
PP1B_DROME1.975e-4450.33Serine/threonine-protein phosphatase beta isoform ... [more]
PP12_DROME2.580e-4443.08Serine/threonine-protein phosphatase alpha-2 isofo... [more]
PP13_DROME3.369e-4452.00Serine/threonine-protein phosphatase alpha-3 isofo... [more]
PP16_ARATH4.400e-4450.32Serine/threonine-protein phosphatase PP1 isozyme 6... [more]
PP12_ARATH7.506e-4449.33Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP1_BRAOL4.865e-4350.67Serine/threonine-protein phosphatase PP1 OS=Brassi... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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