FC875307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE2_HUMAN (Serine/threonine-protein phosphatase with EF-hands 2 OS=Homo sapiens GN=PPEF2 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 252 LCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 L + K+ L++ N+ V + +T+CGD+HGQ DL +F G P+ +Y+F GD+VDRG SVE + +L A + YP+ + RGNHE + YGF E + KY I + D+F + PL L++ ++ LHGG+S Sbjct: 149 LLYETKKHLVQLPNINRVSTCYSEEITVCGDLHGQLDDLIFIFYKNGLPSPERSYVFNGDFVDRGKDSVEILMILFAFMLVYPKEFHLNRGNHEDHMVNLRYGFTKEVMNKYKVHGKEILRTLQDVFCWLPLATLIDEKVLILHGGVS 296
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 315 VTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 VT+CGD+HGQ DL +F G P+ Y+F GD+VDRG SVE + +L A + YP+ + RGNHE + YGF E + KY I + D+F + PL LV+ ++ LHGG+S Sbjct: 174 VTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKEVMHKYKIHGKKILRTLQDVFCWLPLATLVDEKVLVLHGGVS 296
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE1_MOUSE (Serine/threonine-protein phosphatase with EF-hands 1 OS=Mus musculus GN=Ppef1 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 261 KAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 +A+++L + N VK+ +TICGD+HG+ DL +F G + N Y+F GD+VDRG S+E + +L+ + YP + + RGNHE + YGF E L+KY I ++ +++ + P+ ++++EI +HGG+S Sbjct: 148 EARKVLKQMPNFSHVKTFPAKEITICGDLHGKLDDLMLIFYKNGLPSENNPYVFNGDFVDRGNNSMEILMILLVCFLVYPSDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGRKILQVLEEVYTWLPIGTIIDNEILVIHGGIS 292
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus GN=Ppef1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 50/145 (34.48%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 261 KAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 +A++IL + N +++ +TICGD+HG+ DL +F G + N Y+F GD+VDRG S+E + +L+ + YP + + RGNHE + YGF E L+KY I ++ +L+ + P+ ++++EI +HGG+S Sbjct: 146 EARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELYTWLPIGTIIDNEILVIHGGIS 290
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPE1_HUMAN (Serine/threonine-protein phosphatase with EF-hands 1 OS=Homo sapiens GN=PPEF1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 261 KAKEILMEESNVQPVKSP----VTICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 + K++L + N +++ VTICGD+HG+ DL +F G + N Y+F GD+VDRG S+E + +L + YP + + RGNHE + YGF E L KY I +I + + + P+ +V++EI +HGG+S Sbjct: 145 ETKKVLKQMPNFTHIQTSPSKEVTICGDLHGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRGKNSIEILMILCVSFLVYPNDLHLNRGNHEDFMMNLRYGFTKEILHKYKLHGKRILQILEEFYAWLPIGTIVDNEILVIHGGIS 289
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 3 Query: 243 VKALCEKAKEILMEESNVQPVKSPV----TICGDIHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY--GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 674 V + +A + L + N+ PV + V T+CGD+HG+ DL + G +N Y+F GD+VDRG +E + LL++L + +P + + RGNHE + YGF E KY + I +++ + PL +++ S + +HGG S Sbjct: 125 VALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS 275
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 47/150 (31.33%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 249 ALCEKAKEILMEESNVQPVK-----SPVTICGDIHGQFHDLAELFQIGGKCPDTN--YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN--IWKIFTDLFDYFPLTALVESEIFCLHGGL 671 +L + A +IL +E+N + S V + GD+HGQ HDL ++F G+ P N ++F G+Y+ RG +S+E +L+A K+ P+ + +LRG+ E+R + F + +YG ++ D F PL +++ + ++ HGGL Sbjct: 198 SLVDCASQILEKEANCVKINGCSEDSRVIVVGDLHGQLHDLLKIFDQSGR-PSQNQCFVFNGNYIGRGSWSLEVFLVLLAWKIMMPENVILLRGSSETRVSAEELDFLKDICDRYGEHGPMLYSKCIDCFKMLPLASVISNSVYTTHGGL 346 The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bpback to top |