FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.083e-78
Identity = 137/164 (83.54%), Postives = 149/164 (90.85%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +CK LSE QVK+LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_EMENI (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Emericella nidulans GN=pphA PE=3 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.312e-77
Identity = 133/164 (81.10%), Postives = 147/164 (89.63%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I  LM CK L+E  V+ LC++A+E+L EESNVQPVK PVT+CGDIHGQFHDL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLV LK+RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+E++IFCLHGGLSP I+ L
Sbjct:   34 IESLMTCKQLAEEDVRRLCDRAREVLQEESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVCLKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQIFCLHGGLSPSIDTL 197          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_ARATH (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.943e-77
Identity = 133/165 (80.61%), Postives = 148/165 (89.70%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QLM+CKPL E  VK LC++AK IL+EE NVQPVK PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETV+LLVALKVRY  R+TILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+ES++FCLHGGLSP ++ L
Sbjct:   10 QIEQLMECKPLGEADVKILCDQAKAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 5.150e-77
Identity = 134/161 (83.23%), Postives = 147/161 (91.30%), Query Frame = 3
Query:  210 LMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            L +CK L+E QV+ LCEKAKEIL +ESNVQ V+ PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:    1 LNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 161          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.150e-77
Identity = 132/165 (80.00%), Postives = 149/165 (90.30%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QLM+CKPLSE  V+ LC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETV+LLVALKVRY  R+TILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+ES++FCLHGGLSP ++ L
Sbjct:   10 QIEQLMECKPLSEADVRTLCDQARAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 134/164 (81.71%), Postives = 147/164 (89.63%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +C  L+E QV+ LC+KAKEIL +ESNVQ VK PVT+CGD+HGQFHDL ELF+IGGK PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY +RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALV+ +IFCLHGGLSP I+ L
Sbjct:   14 IEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDSL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A5_ARATH (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Arabidopsis thaliana GN=PP2A5 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 134/165 (81.21%), Postives = 148/165 (89.70%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QLM+CK LSE +VK LCE AK IL+EE NVQPVK PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETV+LLVALKVRY  R+TILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+ES++FCLHGGLSP ++ L
Sbjct:   11 QIEQLMECKALSETEVKMLCEHAKTILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTL 175          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2AA_PIG6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN6.083e-7883.54Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A1_EMENI2.312e-7781.10Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_ARATH3.943e-7780.61Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2AB_PIG5.150e-7783.23Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A2_ARATH5.150e-7780.00Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_DROME1.147e-7681.71Serine/threonine-protein phosphatase PP2A OS=Droso... [more]
PP2A5_ARATH1.147e-7681.21Serine/threonine-protein phosphatase PP2A-5 cataly... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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