FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSJ (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 135/165 (81.82%), Postives = 149/165 (90.30%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QISQL +CK L E +V+ALCE+AK ILMEE NVQPV+ PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALVE+++FCLHGGLSP ++ L
Sbjct:   10 QISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSI (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.147e-76
Identity = 135/165 (81.82%), Postives = 149/165 (90.30%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QISQL +CK L E +V+ALCE+AK ILMEE NVQPV+ PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALVE+++FCLHGGLSP ++ L
Sbjct:   10 QISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.556e-76
Identity = 132/165 (80.00%), Postives = 151/165 (91.52%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI+QL +CK L+E +V+ALCE+AK ILMEE NVQPV+ PVT+CGDIHGQF+DL ELF+IGG+ PDTNYLFMGDYVDRGYYSVETV+LLVALKVRY  RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+E+++FCLHGGLSP ++ L
Sbjct:   11 QIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTL 175          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSI (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A3 PE=2 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 2.556e-76
Identity = 132/165 (80.00%), Postives = 151/165 (91.52%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI+QL +CK L+E +V+ALCE+AK ILMEE NVQPV+ PVT+CGDIHGQF+DL ELF+IGG+ PDTNYLFMGDYVDRGYYSVETV+LLVALKVRY  RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+E+++FCLHGGLSP ++ L
Sbjct:   11 QIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTL 175          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_ERYGR (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Erysiphe graminis subsp. hordei GN=PP2A-2 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.437e-76
Identity = 133/164 (81.10%), Postives = 145/164 (88.41%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I  LM CK L E  V  LCEKA+E+L  ESNVQPVK PVT+CGDIHGQFHDL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLVALK+RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FT+LFD+ PLTAL+E++IFCLHGGLSP I+ L
Sbjct:   33 IENLMACKQLPEVDVLRLCEKAREVLHSESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTNLFDFLPLTALIENQIFCLHGGLSPSIDTL 196          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_HEVBR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Hevea brasiliensis GN=PP2A PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.712e-76
Identity = 132/165 (80.00%), Postives = 147/165 (89.09%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI  LM+CKPL E + + LC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTAL+ES+IFCLHGGLSP ++ L
Sbjct:   10 QIEHLMECKPLPEARGQTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.712e-76
Identity = 129/166 (77.71%), Postives = 145/166 (87.35%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            E I  LMQCKPL E  VK L  KA+E+   E NVQPVK PVT+CGDIHGQFHD+ ELF+IGG CPDTNYLFMGDYVDRGY SVETVTLLV+LKVRYP+RITILRGNHESRQITQVYGFYDECLRKYGNAN+W++FTDLFD+ PLT L+E+E+FCLHGGLSP ++ L
Sbjct:    9 EWIEHLMQCKPLPEENVKELVAKAREVFSNEKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWQLFTDLFDFLPLTGLIENEVFCLHGGLSPALDTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_HELAN (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.826e-75
Identity = 133/165 (80.61%), Postives = 147/165 (89.09%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI  LM CKPL E +V+ LC++A+ IL+EE NVQPVK PVT+CGDIHGQFHDL ELF+IGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHESRQITQVYGF+DECLRKYGNAN+WK FTDLFDY PLTAL+ES+IFCLHGGLSP ++ L
Sbjct:   10 QIEHLMDCKPLPE-EVRTLCDQARTILVEEWNVQPVKCPVTVCGDIHGQFHDLLELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFFDECLRKYGNANVWKHFTDLFDYLPLTALIESQIFCLHGGLSPSLDTL 173          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 127/164 (77.44%), Postives = 148/164 (90.24%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +C+PLSE  V+ LC+KA+E+L +E+NVQPV++PVT+CGDIHGQFHDL ELF+IGG  PD NYLFMGDYVDRGY+SVETV+LLVA+K+RYP RITILRGNHESRQITQVYGFYDECLRKYG+AN+WK FT+LFDYFPLTAL+E  IFCLHGGLSP I+ L
Sbjct:   27 IEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSL 190          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_YEAST (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH21 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.187e-73
Identity = 125/162 (77.16%), Postives = 143/162 (88.27%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            I  L +C+PLSE  V  LC+ A ++L  E NV+P+  PVTICGD+HGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETV+ LVA+KVRYP RITILRGNHESRQITQVYGFYDECLRKYG+AN+WK+FTDLFDYFP+TALV+++IFCLHGGLSP IE
Sbjct:   74 IEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPITALVDNKIFCLHGGLSPMIE 235          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A1_ORYSJ1.147e-7681.82Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSI1.147e-7681.82Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A3_ORYSJ2.556e-7680.00Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A3_ORYSI2.556e-7680.00Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A2_ERYGR7.437e-7681.10Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_HEVBR9.712e-7680.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A_ACECL9.712e-7677.71Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A_HELAN2.826e-7580.61Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_SCHPO1.402e-7477.44Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PP2A1_YEAST1.187e-7377.16Serine/threonine-protein phosphatase PP2A-1 cataly... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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