FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.551e-73
Identity = 125/162 (77.16%), Postives = 143/162 (88.27%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            I  L +C+PLSE  V  LC+ A ++L  E NV+P+  PVTICGD+HGQFHDL ELF+IGG CPDTNYLFMGDYVDRGYYSVETV+ LVA+KVRYP RITILRGNHESRQITQVYGFYDECLRKYG+AN+WK+FTDLFDYFP+TALV+++IFCLHGGLSP IE
Sbjct:   82 IEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPVTALVDNKIFCLHGGLSPMIE 243          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A1_SCHPO (Minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 127/164 (77.44%), Postives = 142/164 (86.59%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            I QL +C+PLSE  V  +C+ AKE+L  ESNVQ V+ PVT+CGDIHGQFHDL ELF IGG  PDTNYLFMGDYVDRGY+SVETV+LL+A K+RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+W+ FTDLFDY PLTAL+E  IFCLHGGLSP I+ L
Sbjct:   14 IEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.669e-70
Identity = 120/162 (74.07%), Postives = 144/162 (88.89%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            QI QL +C+PLSE +VKALC KA EIL+EESNVQ V +PVT+CGDIHGQF+D+ ELF++GG CP TNYLFMGD+VDRGYYSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG++N+W+  TD+FDY  L+A+VE++IFC+HGGLSP I
Sbjct:    7 QIGQLKRCEPLSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSSNVWRYCTDIFDYMSLSAVVENKIFCVHGGLSPAI 168          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.962e-68
Identity = 118/163 (72.39%), Postives = 142/163 (87.12%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            +QI QL +C+ L E +VKALC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ N+W+  TD+FDY  L+ALVE++IFC+HGGLSP I
Sbjct:    6 KQIEQLKRCEALKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALVENKIFCVHGGLSPAI 168          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.661e-67
Identity = 116/163 (71.17%), Postives = 141/163 (86.50%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            QI+QL  C+ ++E +VKALC KA+EIL+EESNVQ V +PVTICGDIHGQF DL ELF++GG CPDTNYLF+GD+VDRG+ SVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ N+W+  TD+FDY  L A++E +IFC+HGGLSP I+
Sbjct:    9 QIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIK 171          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.661e-67
Identity = 116/163 (71.17%), Postives = 141/163 (86.50%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            QI+QL  C+ ++E +VKALC KA+EIL+EESNVQ V +PVTICGDIHGQF DL ELF++GG CPDTNYLF+GD+VDRG+ SVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ N+W+  TD+FDY  L A++E +IFC+HGGLSP I+
Sbjct:    9 QIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIK 171          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 2.832e-67
Identity = 114/165 (69.09%), Postives = 143/165 (86.67%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL++C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLLRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.831e-67
Identity = 115/165 (69.70%), Postives = 140/165 (84.85%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +V+ALC KA+EIL+EE NVQ V SPVTICGDIHGQF+DL ELF++GG CP TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFY+EC+RKYG+  +WK  T++FDY  L+ALV+ +IFC+HGGLSP I  L
Sbjct:    8 QIEQLKRCEIIKESEVRALCSKAREILLEEGNVQRVDSPVTICGDIHGQFYDLKELFKVGGDCPQTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYEECVRKYGSVTVWKYCTEIFDYLSLSALVDGKIFCVHGGLSPSINTL 172          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.310e-67
Identity = 114/165 (69.09%), Postives = 142/165 (86.06%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QL +C+ + E +VKALC KA+EIL+EESNVQ V SPVT+CGDIHGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+  +W+  T++FDY  L+A+++ +IFC+HGGLSP I+ L
Sbjct:   10 QIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTL 174          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A2_YEAST1.551e-7377.16Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A1_SCHPO2.645e-7377.44Minor serine/threonine-protein phosphatase PP2A-1 ... [more]
PPX1_ARATH4.669e-7074.07Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PPX2_ARATH1.962e-6872.39Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PPX4_PARTE1.661e-6771.17Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE1.661e-6771.17Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP4C_RABIT2.832e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DICDI4.831e-6769.70Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENTR6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA6.310e-6769.09Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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