FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: FYPP1_ARATH (Phytochrome-associated serine/threonine protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.153e-60
Identity = 104/159 (65.41%), Postives = 130/159 (81.76%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP 677
            IS++   + LSE +++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LFQ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK R+P  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP
Sbjct:    7 ISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSP 165          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP6_RAT (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus GN=Ppp6c PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.354e-60
Identity = 104/159 (65.41%), Postives = 129/159 (81.13%), Query Frame = 3
Query:  216 QCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QCK L E  +K LC+   ++L+EESNVQPV +PVT+CGDIHGQF+DL ELF+ GG+ PDTNY+FMGD+VDRGYYS+ET T L+ALK ++P RIT+LRGNHESRQITQVYGFYDEC  KYGNAN W+  T +FD   + AL++ +I C+HGGLSP I+ L
Sbjct:   15 QCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTL 173          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP6_MOUSE (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus GN=Ppp6c PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.354e-60
Identity = 104/159 (65.41%), Postives = 129/159 (81.13%), Query Frame = 3
Query:  216 QCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QCK L E  +K LC+   ++L+EESNVQPV +PVT+CGDIHGQF+DL ELF+ GG+ PDTNY+FMGD+VDRGYYS+ET T L+ALK ++P RIT+LRGNHESRQITQVYGFYDEC  KYGNAN W+  T +FD   + AL++ +I C+HGGLSP I+ L
Sbjct:   15 QCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTL 173          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 7.471e-60
Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            I  L   + L E  VK LC KAK+IL  E NV  V++PVTICGDIHGQF+DL ELF++GG  P+TNYLF+GD+VDRGY SVET  LL+ALKVRYP +IT++RGNHESRQITQVYGFYDECLRKY   N+WK  T++FDY  L A+V   IFC+HGGLSP+I+
Sbjct:    8 IETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDNIFCVHGGLSPYIK 169          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.274e-59
Identity = 107/162 (66.05%), Postives = 127/162 (78.40%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            I  L   + L E  VK LC KAK+IL  E NV  V++PVTICGDIHGQF DL ELF++GG  P+TNYLF+GD+VDRGY SVET  LL+ALKVRYP +IT++RGNHESRQITQVYGFYDECLRKY   N+WK  T++FDY  L A+V   IFC+HGGLSP+I+
Sbjct:    8 IETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDSIFCVHGGLSPYIK 169          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP6_HUMAN (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.274e-59
Identity = 103/158 (65.19%), Postives = 128/158 (81.01%), Query Frame = 3
Query:  219 CKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            CK L E  +K LC+   ++L+EESNVQPV +PVT+CGDIHGQF+DL ELF+ GG+ PDTNY+FMGD+VDRGYYS+ET T L+ALK ++P RIT+LRGNHESRQITQVYGFYDEC  KYGNAN W+  T +FD   + AL++ +I C+HGGLSP I+ L
Sbjct:   16 CKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTL 173          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP11_YEAST (Serine/threonine-protein phosphatase PP1-1 OS=Saccharomyces cerevisiae GN=SIT4 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.274e-59
Identity = 102/167 (61.08%), Postives = 133/167 (79.64%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            E +  + +C+ L+E ++K LCE  KE+LMEESN+QPV++PVT+CGDIHGQFHDL ELF+  G  PD  NY+F+GDYVDRGYYS+ET TLL+ LKV+YP +IT++RGNHESRQITQVYGFY+ECL KYG+  +WK    +FD+  L A+++ +I C+HGGLSP I  L
Sbjct:    8 EWLETIKKCQALTENEMKQLCEMVKELLMEESNIQPVQTPVTVCGDIHGQFHDLLELFRTAGGFPDDINYIFLGDYVDRGYYSLETFTLLMCLKVKYPAKITLVRGNHESRQITQVYGFYEECLNKYGSTTVWKYCCQVFDFLTLAAIIDGKILCVHGGLSPEIRML 174          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: YOU5_SCHPO (Putative serine/threonine-protein phosphatase C26H8.05c OS=Schizosaccharomyces pombe GN=SPBC26H8.05c PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59
Identity = 100/165 (60.61%), Postives = 132/165 (80.00%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            Q+ +L   + + E  V  LC++ ++IL+EESN+Q + SPVTICGDIHGQ HDL ELF+IGG CP T YLF+GD+VDRG+YSVET  LL+ LK +YP+ +T++RGNHESRQITQVYGFYDEC+RKYG+AN+W+   ++FDY  L ALV+ ++FC+HGGLSP I  +
Sbjct:    9 QLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSI 173          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A4_YEAST (Serine/threonine-protein phosphatase PP2A-like PPG1 OS=Saccharomyces cerevisiae GN=PPG1 PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57
Identity = 101/165 (61.21%), Postives = 131/165 (79.39%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY-GNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIE 686
            E + +L + + L E  V+ALC K KE+L++ESNV  +++PVT+ GD+HGQFHD+ E+FQIGG  PDTNYLF+GDYVDRG YSVET+ LL+ LK+RYP RI +LRGNHESRQITQ YGFY ECL KY GN+ +W+  TD+FDY  L  +++ EIFC+HGGLSP ++
Sbjct:    5 ECLERLYKAQLLPEVTVRALCFKLKEMLVKESNVIHIQTPVTVVGDMHGQFHDMLEIFQIGGPVPDTNYLFLGDYVDRGLYSVETIMLLIVLKLRYPSRIHLLRGNHESRQITQSYGFYTECLNKYGGNSRVWQYLTDIFDYLVLCCIIDDEIFCVHGGLSPNVQ 169          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PPP6_DROME (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.920e-57
Identity = 97/161 (60.25%), Postives = 126/161 (78.26%), Query Frame = 3
Query:  201 ISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFI 683
            I  + +CK L E ++K LCE   +IL+EE+N+ PV +PVT+CGDIHGQF+DL +LF+ GG+ P TNY+FMGD+VDRGYYS+ET T L+ LK RYP RIT+LRGNHE+RQIT+VYGF+DEC  KYGNAN WK    +FD   + A+++ E+ C+HGGLSP I
Sbjct:    8 IEDVKKCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEI 168          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
FYPP1_ARATH1.153e-6065.41Phytochrome-associated serine/threonine protein ph... [more]
PPP6_RAT3.354e-6065.41Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_MOUSE3.354e-6065.41Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPX1_PARTE7.471e-6066.05Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX2_PARTE1.274e-5966.05Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPP6_HUMAN1.274e-5965.19Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP11_YEAST1.274e-5961.08Serine/threonine-protein phosphatase PP1-1 OS=Sacc... [more]
YOU5_SCHPO1.664e-5960.61Putative serine/threonine-protein phosphatase C26H... [more]
PP2A4_YEAST2.035e-5761.21Serine/threonine-protein phosphatase PP2A-like PPG... [more]
PPP6_DROME5.920e-5760.25Serine/threonine-protein phosphatase 6 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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