FC875308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 439 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 +Q + ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK FP+ Sbjct: 25 DQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPE 96
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14 Identity = 38/69 (55.07%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 448 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 +KS R+R YRG+RQRPWGKWAAEIRDP K RVWLGTF+T RG KAK FP+ Sbjct: 61 EKSNSRQRN--YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPE 127
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13 Identity = 34/62 (54.84%), Postives = 38/62 (61.29%), Query Frame = 1 Query: 469 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK FP+ Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPE 147
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 38/79 (48.10%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 418 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK FP+ Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPE 242
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12 Identity = 38/87 (43.68%), Postives = 48/87 (55.17%), Query Frame = 1 Query: 406 KSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDETPA 666 KS G + V T RK+ +RG+RQRPWG+WAAEIRDPT+G RVWLGT++T ++G A FP T A Sbjct: 76 KSIGDRKRRSVSPDSDVTRRKK---FRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTA 159
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 41/96 (42.71%), Postives = 49/96 (51.04%), Query Frame = 1 Query: 382 PFTFSAGRKSHGSTAVKHVEQAKKST-----ERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFP 651 PF FSAG + V ++T E R YRG+R+RPWGK+AAEIRDP K G RVWLGT+ T +RG KA FP Sbjct: 67 PFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFP 162
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 478 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFP 651 ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T +RG A+ FP Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1 Query: 454 STERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFP 651 ST R+ YRG+R+RPWG++AAEIRDP K RVWLGTF+T +RG KAK FP Sbjct: 3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 36/73 (49.32%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 442 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDE 657 + K + K YRG+RQRPWGK+AAEIRDP K G RVWLGTF+T +RG KA FP E Sbjct: 143 EVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLE 215
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 39/90 (43.33%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 403 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDETPAAA 672 R + V V A +T ++K +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT +RG A F TP A Sbjct: 98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTA 184 The following BLAST results are available for this feature:
BLAST of FC875308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875308 ID=FC875308; Name=FC875308; organism=Citrus clementina; type=EST; length=674bpback to top |