FC875309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875309 vs. ExPASy Swiss-Prot
Match: UCRIC_ANASP (Cytochrome b6-f complex iron-sulfur subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=petC3 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37 Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 203 SIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF-APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIXNGKVVFVPWTETDFRTGEAPWW 727 SIP + P + +RQL+N + V++ G L P F AP AGG AKD +G I A+ L P R L GL G+PTYL+V++D TL G+ CTHLGC PWN + +F CPCHGS+Y G VVRGPAPL L + + + ++ PWTETD RTG+ PWW Sbjct: 4 SIPIES-PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILGKQIPASQIL-AEPPQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWNPLDQQFQCPCHGSRYAPDGSVVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPWW 177
BLAST of FC875309 vs. ExPASy Swiss-Prot
Match: UCRIB_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35 Identity = 77/169 (45.56%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 224 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIXNGKVVFVPWTETDFRTGEAPWW 727 P M +RQL+N V+ + P FF PP + A GG AKD IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L H + + + W ETD RTGE PWW Sbjct: 10 PSMSRRQLLNFFTGAIVAATASAAIYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQIL-VQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPWW 177
BLAST of FC875309 vs. ExPASy Swiss-Prot
Match: UCRIB_ANASP (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=petC2 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35 Identity = 76/169 (44.97%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 224 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIXNGKVVFVPWTETDFRTGEAPWW 727 P M +RQL+N V+ + P FF PP + A GG A+D IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L + + + PW ETD RTGE PWW Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQIL-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177
BLAST of FC875309 vs. ExPASy Swiss-Prot
Match: UCRI_CHLTE (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium tepidum GN=petC PE=3 SV=4) HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12 Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 452 DPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIXNGKVV 676 D +VV +L + ++A+CTHLGC+V W+ A + CPCHG++Y G+++ GP PL L I +GK+V Sbjct: 105 DDKVIVVNHGGSLTA--VSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIV 177
BLAST of FC875309 vs. ExPASy Swiss-Prot
Match: UCRI_CHLLT (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium limicola f.sp. thiosulfatophilum GN=petC PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 2 Query: 464 LVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIXNGKVV 676 +VV K L + ++AVCTHLGC+V W A+N++ CPCHG++Y G ++ GP PL L A I ++ Sbjct: 109 IVVNKGGALTA--VSAVCTHLGCLVNWVDADNQYFCPCHGAKYKLTGEIISGPQPLPLKQYKARIEGDSII 177 The following BLAST results are available for this feature:
BLAST of FC875309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875309 ID=FC875309; Name=FC875309; organism=Citrus clementina; type=EST; length=737bpback to top |