FC875311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 329.717 bits (844), Expect = 8.820e-90 Identity = 151/215 (70.23%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELF+AAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC VE GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.566e-89 Identity = 152/215 (70.70%), Postives = 179/215 (83.26%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKG GSVF +HT RKG + R+LD+ ER+GYLKG V +IIHDPGRGAPLA V FR P+++ +K+LFIAAEGMYTGQFVYCGK+A L +GNVLP+ +PEG +VCN+E GDRG LAR SG+YA +I+HNPD TRVKLPSGAKK++PS RAM+G VAGGGR +KP+LKAG AY K++VKRNCWPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAVVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 150/215 (69.77%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 150/215 (69.77%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_MOUSE (60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 150/215 (69.77%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_HUMAN (60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 150/215 (69.77%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_BOVIN (60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3) HSP 1 Score: 327.791 bits (839), Expect = 3.352e-89 Identity = 150/215 (69.77%), Postives = 182/215 (84.65%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3) HSP 1 Score: 326.25 bits (835), Expect = 9.752e-89 Identity = 149/215 (69.30%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIR QRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG+V +IIHDPGRGAPLA+V FR P+R+ K+ ELFIAAEG++TGQF+YCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ +RVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAKVMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3) HSP 1 Score: 325.865 bits (834), Expect = 1.274e-88 Identity = 150/215 (69.77%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 21 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGRVIRAQRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG+V +IIHDPGRG PLA+V FR P+R+ K+ ELFIAAEG++TGQFV+CGKKA L +GNVLPV +PEG ++C +E GDRG LARASG+YA +ISHNP+ +RVKLPSGAKK+I S RA++G VAGGGR +KP+LKAG AYHK++VKRNCWP+VRGVAMNPVEHP GG N Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGTPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVFCGKKAQLNIGNVLPVGVMPEGTIICCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGAKKVISSTNRAVVGVVAGGGRIDKPILKAGRAYHKYKVKRNCWPRVRGVAMNPVEHPFGGGN 215
BLAST of FC875311 vs. ExPASy Swiss-Prot
Match: RL8_DICDI (60S ribosomal protein L8 OS=Dictyostelium discoideum GN=rpl8 PE=1 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 7.727e-86 Identity = 148/216 (68.52%), Postives = 178/216 (82.41%), Query Frame = 3 Query: 21 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGSN 665 MGR+IRAQRKG AGSVF +HTHHRKG +FR+LD+ ER GY+KGVV EIIHDPGRGAPLARV F+ ++ K+LFIA EGM+TGQFV+ GKKATL +GN+LP+ +PEG ++CNVE +GD G +AR SG+YA I+SHNPD TR+KLPSG+KK + S RAMIG VAGGGR +KP+LKAG A+HK+RVK+N WPKVRGVAMNPVEHPHGG N Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLARVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEKLGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPMLKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGN 216 The following BLAST results are available for this feature:
BLAST of FC875311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875311 ID=FC875311; Name=FC875311; organism=Citrus clementina; type=EST; length=690bpback to top |