FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=ispF PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 61/122 (50.00%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHGFD+H PLIIGG+ VP+ G AHSDGDV LH + DAILGA L DIG++FPD+D ++K A S ++EA R + E GY+IGN+D T+I PK+ P+ + +R ++E L D Sbjct: 3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCD 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERE8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GNLD T+I PK++P+ +R +L+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRALLREAYRRILAKGYRLGNLDITIIAQAPKMAPHIPQMRVHLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PHOPR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photobacterium profundum GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 58/122 (47.54%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH V DA+LGA+G DIG+ FPD+D +WKGA S +++ + + GY +GNLD T+I PK++PY + + ++E L D Sbjct: 2 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHAVCDALLGAIGAGDIGRHFPDTDAEWKGADSRFLLRDVYSKVKDKGYRLGNLDVTIIAQAPKMAPYIDAMCQAIAEDLETD 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_FUSNN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 57/119 (47.90%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 R+G+G+D+H+L G L++GG+ VPH +G HSDGDVLLH + DAI+GALGL DIG FPD+D K S++ +K+ +M E Y+I NLD+ +++ +PKL PY ++IR N++++L Sbjct: 3 RIGNGYDVHKLVEGRKLMLGGVEVPHTKGVLGHSDGDVLLHAITDAIIGALGLGDIGLHFPDNDENLKDIDSAILLKKINNIMKEKNYKIVNLDSIIVMQKPKLRPYIDSIRDNIAKIL 121
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_ENTFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Enterococcus faecalis GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 57/116 (49.14%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+G GFD+H+L P PLIIGG+ +P+E+G HSD DVL H ++DAILGA GL DIGQ+FP++DP++K A S +K+ + +G+ IGN+D T++ PK+SPY ++ NL+ Sbjct: 3 RIGQGFDVHQLVPQRPLIIGGVTLPYEKGLLGHSDADVLTHAIIDAILGAAGLGDIGQLFPETDPQFKNANSVNLLKKVNEKVGRSGFTIGNIDCTILAEEPKMSPYLAEMKKNLA 118
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_CLOAB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Clostridium acetobutylicum GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 RVG G+D+H+L LI+GG+ + + +G HSD DVL+H ++D+ILGA GL DIG++FPDSD K+KG S +KE L+ + GY+IGN+D+T+I +PK+SPY E I+ +L +L D Sbjct: 2 RVGIGYDVHKLVENRKLILGGVEIQYSKGLLGHSDADVLVHAIIDSILGAAGLGDIGKLFPDSDNKYKGISSLKLLKEVNALIKDKGYKIGNIDSTIIAQKPKISPYIEDIKKSLCNVLDID 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BURM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 60/123 (48.78%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 + FR+G G+D+H+L G PLIIGG+++P+ERG HSD DVLLH + DA+ GA L DIG+ F D+D +KGA S V ++E V + AG+ I N+D+T+I PKL+P+ E +R N++ LG Sbjct: 1 MDFRIGQGYDVHQLVAGRPLIIGGVSIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDAAFKGADSRVLLRECVARVKAAGFAIQNVDSTVIAQAPKLAPHIEAMRANIAADLG 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_AZOVD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 56/117 (47.86%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHG+D+HR G + +GG+ +PH G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KG S V ++ V L+ E G+ +GN+DAT++ PK++P+ E +R +++E Sbjct: 2 RIGHGYDVHRFAEGDFVTLGGVRIPHRFGLLAHSDGDVLLHALCDALLGAAALGDIGRHFPDTDPRFKGVDSRVLLRHVVALVREKGWRVGNVDATIVAQAPKMAPHIERMRLSIAE 118
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_ANAVT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispF PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 57/126 (45.24%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 + R+G+G+D+HRL LI+GG+++PHE G HSD DVL H ++DA+LGAL L DIG FP +DP+W GA S V + + L+ G+ IGN+D+ ++ RPKL P+ +T+R L+ +L +P Sbjct: 3 MSIRIGNGYDIHRLVSDRALILGGVHIPHELGLLGHSDADVLTHAIMDAMLGALSLGDIGHYFPPTDPQWAGADSLVLLNQVNELIRAQGWRIGNIDSVVVAERPKLKPHIKTMRDKLANVLQLEP 128
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_VIBCM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ispF PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHGFD+HR P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + GY +GN D T+I PK++PY + + ++E L D Sbjct: 3 RIGHGFDVHRFGGEGPIIIGGVKIPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKAQGYVLGNADVTIIAQAPKMAPYIQAMCAAIAEDLETD 124 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |