FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter sulfurreducens GN=ispF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32 Identity = 62/123 (50.41%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 R+GHG+D+HRL G LI+GG+++PHE G HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L G+ +GNLDAT++ RPK++P+ +R +++ L ADP Sbjct: 2 RIGHGYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISDAILGALALGDIGKHFPDTDPRYKGADSRALLRHVMELATRKGFHLGNLDATIVAQRPKMAPHIPLMREHIAADLMADP 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32 Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 FR+G GFD+H G PLIIGG+ +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I +PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32 Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I +PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32 Identity = 59/120 (49.17%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I PK++P+ E +R NL++ LG Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLG 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_GEOMG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHG+D+H L G LI+GG++VP+ERG HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L + GY +GN+DAT++ RPKL+P+ +R NL+E L A+ Sbjct: 2 RIGHGYDVHCLVEGRKLILGGVDVPYERGLLGHSDADVLLHAIADAILGALALGDIGKHFPDTDPQFKGADSRKLLRHVMALAGQKGYVLGNVDATIVAQRPKLAPFIPEMRANLAEDLIAE 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_RALEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ispF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32 Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 307 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 +PF RVG G+D+H L PG LI+GG+ +PH+RG HSD D LLH V DA+ GA L DIG+ FPD+D ++ GA S V ++EA R + EAGYEIGN+DAT+I PKL+P+ + NL+E LG Sbjct: 2 MPFDIRVGQGYDVHALVPGRKLILGGVEIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDAQFAGADSRVLLREAARRVREAGYEIGNVDATVIAQAPKLAPHIGAMVANLAEDLG 126
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PECCP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ispF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32 Identity = 61/117 (52.14%), Postives = 87/117 (74.36%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ PL+IGG+ +P+ +G AHSDGDV+LH V DA+LGA L DIG++FPD+DP +KGA S ++EA R ++E GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGGEGPLVIGGVRIPYTQGLLAHSDGDVVLHAVTDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAWRRINEKGYQLGNLDVTIIAQAPKMAPHIPQMRVNLAE 118
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACCN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32 Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 FR+G GFD+H G PLIIGGI +P+E+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I +PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_SALRD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salinibacter ruber (strain DSM 13855) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31 Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 R+G G+D+HRL G PLI+GG+ VPH+RG HSD DVLLH V DA+LGA L D+G FPD+D KWK A S ++ V + AGY N+DAT++L RPKL P+ + +RTN++ L Sbjct: 2 RIGFGYDVHRLVEGRPLILGGVQVPHDRGLAGHSDADVLLHAVADALLGAAALGDLGAHFPDTDAKWKDADSQALLRRVVERVQHAGYAPHNVDATVLLERPKLRPHVDEMRTNIARAL 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_RALSO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia solanacearum GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31 Identity = 63/126 (50.00%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + EAGY++GN+DAT+I +PKL+P+ + NL+ LG P Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVREAGYDVGNVDATVIAQKPKLAPHVPGMVANLAADLGIAP 129 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |