FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PELTS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ispF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.251e-23 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 RVG G+D+H+L G PL++GG+++P +G HSD DVL H V+DA+LGA G DIG+ FPD+D ++KG S + ++ G + N+D+ ++ PKLSP+ E ++ ++ L P Sbjct: 2 RVGFGYDVHKLVEGRPLVLGGVSIPFVKGLLGHSDADVLAHAVMDALLGAAGAGDIGRHFPDNDGRYKGISSMKLLARVGDILSRQGLAVVNIDSVVVAQGPKLSPFIEEMQKRMAGALQIQP 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_CHLCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=ispF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.251e-23 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R+G G D+H G L+IGG+ +P G + HSD DVLLH + DA+LGA L DIG FP++ ++K S + +K +L+ E GY N+DA L+L PK++PY + +R N+++ LG Sbjct: 2 RIGIGIDVHPFAAGRKLVIGGVYIPGHDGLDGHSDADVLLHAISDALLGAAALGDIGLHFPNTSAEFKDIDSMILLKHVGKLLAEHGYAPVNVDAMLLLEAPKIAPYIQQMRQNIADALG 121
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_NITSB (Bifunctional enzyme ispD/ispF OS=Nitratiruptor sp. (strain SB155-2) GN=ispDF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.251e-23 Identity = 48/119 (40.34%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 R+G+G D+H L + GI +P+++G HSD DV +H ++DA+LGA G DIG++FPDSD +K S + E VRL+ G+ I ++D T++ PK+ P+KE ++ +L +LL Sbjct: 213 RIGNGLDVHAFCEDRKLYLCGIEIPYDKGLAGHSDADVAIHALIDALLGAAGFGDIGELFPDSDETYKDIDSKKLLCETVRLLRACGFVIEHVDLTIVAQNPKIGPFKEKMKESLHDLL 331
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_SYNAS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Syntrophus aciditrophicus (strain SB) GN=ispF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 RVG G+D HR LI+GG+ +PHE G HSD D L H + DA+LGA+ DIG FPDSDP + G S + + + ++D+ G+ I +D+T+I+ RPKL PY +++ ++ +L Sbjct: 2 RVGCGYDSHRWAAKRKLILGGVEIPHEFGLTGHSDADALTHAICDALLGAISEGDIGFQFPDSDPAYSGISSLKLLSKILEMVDKKGFAIDYIDSTVIMERPKLMPYIPDMKSKIAGVL 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_SACD2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ispF PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+G G D+H G ++IGG+ +P+ERG AHSDGDVLLH + DA+LGA L DIG+ FPD+D +K A S ++ + GY + N D T++ PK++P+ +R ++E Sbjct: 2 RIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAE 118
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_LAWIP (Bifunctional enzyme ispD/ispF OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=ispDF PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 53/128 (41.41%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 319 VGHGFDLHRL-------EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 VG+G+D+H+ +P + +GGI++P+ AHSDGDVLLH ++DA+LG +G DIG FPDSD ++ G S++ + + + E+ +I ++DAT++ PK+S Y+E IR+NLS LL D Sbjct: 237 VGYGYDVHKYVTEDQINQPIRSMRLGGISIPNAPNVVAHSDGDVLLHALMDALLGCIGGGDIGLHFPDSDKRYDGINSAILLDHVLTKVLESSIKIVHMDATIVAQLPKISQYREAIRSNLSRLLDLD 364
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_WIGBR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Wigglesworthia glossinidia brevipalpis GN=ispF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 RVGHGFD+H+ Y PLI+GG+++P+ +G +HSDGDV++H ++D++LGA L DIG +FP++D K+K S + ++ + + Y+IGN+D TL L PK+S Y I +S L Sbjct: 2 RVGHGFDIHKFGKIYKPLILGGVHIPYCKGVVSHSDGDVIIHSIIDSLLGASSLGDIGILFPNNDIKYKNINSCILLQVVWNCIKKK-YKIGNIDVTLFLEYPKISSYTNKICLCISNCL 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_AZOPC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=ispF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 46/125 (36.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 + R+G G+D+H L Y L +GGI +P+E+G + HSD DVL+H + DA+LGA + +IG FP+++ K + S + +K+ + + YE+ N D T+ + +PKL+P+ ++T L+E++ D Sbjct: 1 MKIRIGFGYDVHPLVMNYNLWLGGIKIPYEKGLKGHSDADVLIHALCDALLGAADIGNIGTNFPNTNKKLRNIDSKILLKQTMSFIYSKNYELNNADITVCIEQPKLNPFIPQMKTCLAEIMQTD 125
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_SULDN (Bifunctional enzyme ispD/ispF OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ispDF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 G GFD+H + + +GGI + E G AHSDGDV +H ++DA+LGA G+ DIG +FPD+D K+KGA S + V + G+ I N+D T+ +P++ YK +R +S +LG D Sbjct: 228 GVGFDVHAFDDKGEMFLGGIKIDSEYGFLAHSDGDVAIHALIDALLGAAGMGDIGMMFPDNDVKYKGADSKELLGTLVTKLRHFGFVIVNVDITIAAEKPRIGNYKMAMRKKISSILGID 347
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_GRABC (Bifunctional enzyme ispD/ispF OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ispDF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R+G G+D+H E G LI+ GI VPH +G HSD DV +H + DAI GAL DIG+ FP ++ WK A S+ F++ A + G + N D TLI +PK++P+ + L+ELLG Sbjct: 220 RIGTGYDVHAFETGRKLILCGIEVPHHQGLAGHSDADVGIHALCDAIYGALAEGDIGRHFPPTEASWKDADSARFLRHAAERIAARGGFLANADLTLICEKPKITPHAPAMIARLAELLG 339 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |