FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJD (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=ispDF PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = 1 Query: 322 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA L DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ PKL +K+ +++N++ L D Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAVLGDIGELYPDTDMKFKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLD 332
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACV8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 + RVG GFD+H+L G L +GGI HE G HSD DVL+H + DA+LGA + DIG FPD+ ++K S + + E V L+ GY++GN+DAT+ RPKL ++ L+ L+ D Sbjct: 1 MKIRVGFGFDVHQLVTGRELWLGGIKFEHELGLLGHSDADVLIHAICDALLGAANMRDIGYHFPDTAGEFKNIDSKILLAETVDLIAAKGYKVGNVDATICAERPKLKARIPEMQLVLAHLMRID 125
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_LEIXX (Bifunctional enzyme ispD/ispF OS=Leifsonia xyli subsp. xyli GN=ispDF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGA 678 R+G G D H +P L + G+ E G HSDGDV+ H +VDA+L A L DIG +F DP++ GA VF+ E RL++E G+ IGN+ A ++ RPK +P + T LS +LGA Sbjct: 234 RIGFGTDTHAFDPSAELWLAGLRWEGEPGLAGHSDGDVVAHAIVDALLSAARLGDIGGVFGTGDPRFSGAHGEVFLTETRRLVEEEGFRIGNVSAQIVGNRPKFAPRRAEAETLLSRVLGA 354
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_HELHP (Bifunctional enzyme ispD/ispF OS=Helicobacter hepaticus GN=ispDF PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22 Identity = 48/118 (40.68%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 319 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 +G+G D+H+ E + +GG+ + G +AHSDGDV+LH + DAILGA+G DIG+ FPD+D +K A S + + E GYE+ N D ++I PK++PYK +R ++ +L Sbjct: 225 IGNGIDVHQFEKNKQMWLGGVEIESPFGFKAHSDGDVVLHALSDAILGAIGGGDIGEWFPDTDETYKNADSKMMLSEIYTFAQSVGYELYNADISIIAQTPKIAPYKSAMRECIARIL 342
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_DESVV (Bifunctional enzyme ispD/ispF OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ispDF PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 319 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 VG G+D+HR G P+ +GG+ +P AHSDGDVLLH + DA+LG +G DIG FPDSD + A S++ + + + EA + ++D T++ PKLSP+++ IR N++ LL Sbjct: 239 VGWGYDVHRYGEGRPMKLGGVLIPEGPEVVAHSDGDVLLHALADALLGCIGAGDIGLHFPDSDAAFDNANSAMLLDRVLHMTHEARLRLTHVDLTIVAQVPKLSPWRDKIRANVARLL 356
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_DESVH (Bifunctional enzyme ispD/ispF OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ispDF PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 319 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 VG G+D+HR G P+ +GG+ +P AHSDGDVLLH + DA+LG +G DIG FPDSD + A S++ + + + EA + ++D T++ PKLSP+++ IR N++ LL Sbjct: 239 VGWGYDVHRYGEGRPMKLGGVLIPEGPEVVAHSDGDVLLHALADALLGCIGAGDIGLHFPDSDAAFDNANSAMLLDRVLHMTHEARLRLTHVDLTIVAQVPKLSPWRDKIRANVARLL 356
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_LEPBP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=ispF PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 313 FRVGHGFDLHRL--EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSEL 669 FRVG+G D H+L EP PL++ G+ + E HSD DV+LH V DAILGAL L DIG FPD+DP++K S+ I++ + L+ E +++ N+D T + PK+SP + + +L+ + Sbjct: 2 FRVGNGIDFHKLIHEPFRPLVLAGVEIKSEFAFLGHSDADVILHAVADAILGALSLGDIGVHFPDTDPQYKNMKSTRIIEKCLELVAEKKFKLINVDCTYVGDHPKISPIRAELNASLANI 122
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_LEPBA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=ispF PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 313 FRVGHGFDLHRL--EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSEL 669 FRVG+G D H+L EP PL++ G+ + E HSD DV+LH V DAILGAL L DIG FPD+DP++K S+ I++ + L+ E +++ N+D T + PK+SP + + +L+ + Sbjct: 2 FRVGNGIDFHKLIHEPFRPLVLAGVEIKSEFAFLGHSDADVILHAVADAILGALSLGDIGVHFPDTDPQYKNMKSTRIIEKCLELVAEKKFKLINVDCTYVGDHPKISPIRAELNASLANI 122
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_MAGSA (Bifunctional enzyme ispD/ispF OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ispDF PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLI-IGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R G+D+HR +P + G+ VPHE G HSD DV LH + DA+LGA+ DIG FP +D +WKGA S F+ A L+ G I N+D T+I RPK+ P++ + ++E+LG Sbjct: 227 RSASGYDVHRFDPAKDACWLCGVPVPHEAGLLGHSDADVGLHALTDAVLGAISAGDIGHHFPPTDARWKGAASDQFLAHAGSLVTAKGGRIVNVDVTIICERPKVGPHRAAMAARVAEILG 347
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_MYCMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 49/121 (40.50%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGA 678 RVG G D+H +EPG P + G+ P GC HSDGDV H + DA+L A GL DIG +F DP+W+G + ++ V L+ + GY +GN ++ RPK+ + + LS LL A Sbjct: 6 RVGLGVDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAAHALCDAVLSAAGLGDIGDVFGVGDPRWEGVSGATMLRHVVELITQHGYRVGNASVQVVGNRPKIGWRRYEAQAVLSRLLNA 126 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |