FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_EHRRW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia ruminantium (strain Welgevonden) GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 313 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 FR+G G+D+HR + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A SS F+ EA + E GY I N D +I +PK+ PY ++ +++ DP Sbjct: 10 FRIGIGYDVHRFDNINNDDSNTSITICGIKINYHKKIIAHSDGDVGLHALADAILGAVGCGSIGQHFPNTDKKWKNAESSHFVIEAQKKAQERGYIISNADIIIICEQPKIMPYALEMQHYIAQFTSIDP 139
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_EHRRG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia ruminantium (strain Gardel) GN=ispF PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 313 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 FR+G G+D+HR + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A SS F+ EA + E GY I N D +I +PK+ PY ++ +++ DP Sbjct: 10 FRIGIGYDVHRFDNINNDDSNTSITICGIEINYHKKIIAHSDGDVGLHALADAILGAVGCGSIGQHFPNTDQKWKNAKSSHFVIEAQKKAQERGYIISNADIIIICEQPKIMPYALEMQHYIAQFTSIDP 139
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+G+GFD+H PLIIGG+ +P+ +G AHS+GD+L+H ++DA+LGA + DIG FP D K+K S + +K + + Y I N+D T+I PK+ Y +R+N++ Sbjct: 2 RIGYGFDIHAFGSIKPLIIGGVQIPYNKGLIAHSNGDLLIHSLIDALLGATAMGDIGTFFPSEDKKYKNINSRILLKYIWKRIYLKNYRISNIDITIITETPKILSYIFLMRSNIA 117
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BUCA5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=ispF PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 50/116 (43.10%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_DESPS (Bifunctional enzyme ispD/ispF OS=Desulfotalea psychrophila GN=ispDF PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPY 636 R+GHGFD H+L LI+GG+ +P+ G HSD DVL+H + DA+LGA+G DIG+ FPDS +K S ++ ++ + E Y+IGN D ++I PKL+PY Sbjct: 232 RIGHGFDAHQLVEKRRLILGGVEIPYHLGLAGHSDADVLVHALCDALLGAIGAGDIGRHFPDSSDAFKDIYSIRLLESVMQKVGELNYKIGNADISVICQAPKLAPY 338
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_SPHWW (Bifunctional enzyme ispD/ispF OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=ispDF PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21 Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLG 675 R GFD+H G + +GG+ + H+R HSD DV LH + DA+LG + DIG FP SD +WKGA S++F+ A L+ AG + +D T+I PK+ P++ IR ++ LLG Sbjct: 225 RTAMGFDVHGFTAGDGVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDQRWKGADSAMFLAHARDLVAAAGGIVDFVDLTIICEAPKVGPHRAAIRDRIAALLG 344
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_PELUB (Bifunctional enzyme ispD/ispF OS=Pelagibacter ubique GN=ispDF PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.046e-21 Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 + G GFD+HRL P L +GG+ +P G HSDGD +LH V DAILGA + DIG+ F D + K+K S++ + E ++ + GY I NLD +I +PK+ YK+ I ++++ P Sbjct: 215 KFGIGFDVHRLVPNKKLYLGGVKIPSPIGTLGHSDGDPVLHAVTDAILGACSMGDIGEKFSDKNKKFKNIRSTILLSEIIKQTLKKGYLINNLDINIITQKPKIQKYKKQILNCIAKICNISP 337
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_CELJU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPY 636 + R+G G+D+H G ++IGG+ +PH G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+D +++ A S ++ + + G+++ N D T++ P+++ Y Sbjct: 1 MSMRIGQGYDVHAFGEGEKIVIGGVVIPHHHGLVAHSDGDVLLHALCDALLGAVALGDIGKHFPDTDMQYRNADSRSLLRMVYAKVSQHGWKLANADMTIVAQAPRMASY 110 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |