FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_ACAM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 57/125 (45.60%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADPPL 690 R+G+G+D+H+L G PLI+GG+ + H G + HSD DVL H ++DA+LGAL L DIG FP +DPKW GA S +++ +L+ + G++IGN+D+ ++ RPKL P+ E +R +S++L P L Sbjct: 5 RIGNGYDIHQLVEGRPLILGGVQIEHSLGLKGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPKWAGADSLKLLEQVHQLILDRGWQIGNIDSVVVAERPKLKPHIEAMRDRISQVLNLSPEL 129
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_NOVAD (Bifunctional enzyme ispD/ispF OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ispDF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.610e-30 Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADPPL 690 R G GFD+HRL G L + G+N+PH +G HSD DV +H +VDA+LGA+ DIG FP SDP+WKGA S F+ A L+ EAGY I N+D T+I PK+ P+K +R L+ +LG D L Sbjct: 231 RTGMGFDVHRLVEGEELWLCGVNIPHGKGLSGHSDADVAIHALVDALLGAIAAGDIGDHFPPSDPQWKGASSDRFLAHAGTLVTEAGYRIANVDVTIICEAPKIGPHKAAMRETLARILGIDSAL 355
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_GEOLS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30 Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHG+D+HRL LI+GG+++P E+G HSD DVLLH + DA+LGAL + DIG+ FPD+DP +KGA S ++ V L+ GY +GNLDAT+I RPK++P+ + +R N++ G + Sbjct: 2 RIGHGYDVHRLVEDRKLIMGGVDIPWEKGLLGHSDADVLLHAIADALLGALAMGDIGKHFPDTDPAFKGADSMKLLEHVVGLIRTQGYAVGNLDATIIAQRPKMAPHIQAMRENVARACGVE 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPDF_SILST (Bifunctional enzyme ispD/ispF OS=Silicibacter sp. (strain TM1040) GN=ispDF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30 Identity = 57/122 (46.72%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+G+G+D+HR PG +++ G+ VPHERG + HSD DV +H V DA+ GA+ DIG+ FP SDP+WKGA S +F++ AV L G+ I N+D TL+ PK+ P+ E +R ++E++G D Sbjct: 227 RLGNGYDVHRFGPGDHVMLCGVQVPHERGLQGHSDADVGMHAVTDALYGAMAEGDIGRHFPPSDPQWKGAASDIFLRHAVELARSKGFTINNVDCTLVCEYPKVGPHAEAMRARMAEIMGMD 348
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_SHESH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 59/116 (50.86%), Postives = 84/116 (72.41%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+GHGFD+H+ G PL++GG+++P+E G AHSDGDV+LH + DA+LGA+ L DIG+ FPD+D ++KGA S ++ RL E GY +GNLD T+I PK++P+ E IR L+ Sbjct: 4 RIGHGFDVHKFGGGSPLLLGGVHIPYETGLIAHSDGDVVLHAISDAVLGAVALGDIGKHFPDTDEEFKGADSRHLLRHCYRLAKEKGYSMGNLDVTIIAQAPKMAPHIEAIREVLA 119
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_SHELP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+GHGFD+H+ PLI+GG+ VP++ G AHSDGDV+LH + DAILGA+ L DIG+ FPD+DP +KGA S V ++ +L + GY +GNLD T+I PK+ P+ + IR LS L +D Sbjct: 4 RIGHGFDVHKFGGELPLILGGVEVPYDTGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDPDFKGADSRVLLRHCYQLALDKGYRLGNLDVTIIAQAPKMLPHIQAIRECLSADLESD 125
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_LISIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Listeria innocua GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 59/123 (47.97%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 R+G G+D+H+L+ LIIGGI +P+E+G HSD DVLLH + DAI+GA+G DIG FPD+D +K A S+ + E R ++ G+++GNLDAT+I +PK++PY E ++ ++ELL A+P Sbjct: 3 RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEP 125
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_DESAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 59/122 (48.36%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 RVG+G+D+HRL G PL++GG+ +P ++G + HSD DVLLH V DA+LGA GL DIG FPD DPK+K S+ ++E R + + GY+I NLDATL+ PK+ PY++ + + +++ LG + Sbjct: 2 RVGYGYDVHRLVDGRPLVLGGVTIPFDKGLKGHSDADVLLHAVCDALLGAAGLGDIGMHFPDKDPKYKNIASTRLLEETGRKIAQEGYKIVNLDATLVAEAPKIGPYRQEMVSVIAKCLGLE 123
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30 Identity = 58/122 (47.54%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 R+G GFD+H+L G PL++GG+++PH +G HSD DVLLH + DA LGA+G D+G+ FPD+D +K A S + +A +L+ AGY +GN+D T++ +PKL+PY E +R ++ELL D Sbjct: 3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETD 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S ++ ++ + GY +GN+D T+I +PK+ PY E +R ++E L AD Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEAD 124 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |