FC875314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERPN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERPG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERPE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis GN=ispF PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_YERP3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 316 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRRILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_XYLFT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 307 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGADP 684 L R+G G+D+H P +++GG+ VPH G AHSDGDV+LH + DA+LGALGL DIGQ FP SD +WKGA S VF++ L+ E + +GN+DAT I PK++PY +R ++ LL P Sbjct: 13 LNVRIGQGYDVHAFGPSDHVMLGGVRVPHRCGVLAHSDGDVILHALCDAMLGALGLGDIGQHFPPSDVRWKGADSGVFVRHCNLLLRERDWCVGNVDATAICESPKIAPYVNAMREGIARLLEVQP 138
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PSEE4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas entomophila (strain L48) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 56/116 (48.28%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLS 663 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S V ++ V ++D G+++GN+DAT++ PK++P+ ET+R ++ Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRVLLRHVVGIVDNKGWKVGNVDATIVAQAPKMAPHIETMRQQIA 117
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_PELPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELL 672 R+GHG+D+H+L G LI+GG+++P E+G HSD DVLLH + DAILGALG DIG+ FPD+DP +KGA S ++ L GY +GNLDAT+I RPK++P+ +R N++ +L Sbjct: 2 RIGHGYDVHKLVEGRKLIMGGVDIPWEKGLLGHSDADVLLHAIADAILGALGEGDIGKHFPDTDPAYKGADSLKLLEHVANLAIAKGYCLGNLDATIIAQRPKMAPHIPAMRENIARVL 120
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_GEOKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus kaustophilus GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 313 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSELLGAD 681 FR+G GFD+H+L G PLIIGG+ +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S+ + L + GY + N D T+I +PKL+PY E +R ++ LL A+ Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGVTIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRFKDADSAELLAHVWALARQEGYRLVNADCTIIAQKPKLAPYIEEMRAVIARLLEAE 124
BLAST of FC875314 vs. ExPASy Swiss-Prot
Match: ISPF_EDWI9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=ispF PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 316 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILXRPKLSPYKETIRTNLSE 666 R+GHGFD+HR PLIIGG+ + H +G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GNLD TLI PK++P+ +R L+E Sbjct: 2 RIGHGFDVHRFGGEGPLIIGGVRIAHPQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAYKGADSRALLREAYRSIRARGYRLGNLDITLIAQAPKMAPHIPQMRVFLAE 118 The following BLAST results are available for this feature:
BLAST of FC875314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875314 ID=FC875314; Name=FC875314; organism=Citrus clementina; type=EST; length=694bpback to top |