FC875315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 385 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN 720 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ N Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGN 129
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14 Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 388 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 +++ ++MVGLD AGKT ++ PT+GF+ + T++D+GG +IR +W++Y+ + G+IFVVDS+D +R+ E ++ + +L + +LV AN + Sbjct: 20 RKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQ 132
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 313 KSFIFFLRAKMGLSFTKLFS---KLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLV 711 + ++ ++AK+ + K+F K K IL +G+D AGKTT++ KLK +PT + +E N+ V D+GG R WR YF + G++F+VD +D +R E R+ +L+ ++ V+L+ Sbjct: 6 QEYLGVVKAKLTEFYEKVFQNFVKSLFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLEKRAPVVVLM 141
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12 Identity = 36/98 (36.73%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 385 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLN 678 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VDS D++R E++ EL +L+ Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 388 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 ++ +L++GLD AGK+T L L + IPT GFN + K+ + ++GG +R W+ + L+FVVDS DR R+ AR ELH++L++D D ++V AN + Sbjct: 76 EQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDP--DLPVVVVANKQ 187
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 385 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 +K +IL++GLD AGKT++L+ L + ++ PT GF+ + ++ ++GG R W Y LIFVVDS D R+ EA+ LH+++ + + L+VFAN + Sbjct: 16 EKNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQ 128 The following BLAST results are available for this feature:
BLAST of FC875315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875315 ID=FC875315; Name=FC875315; organism=Citrus clementina; type=EST; length=732bpback to top |