FC875315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 197.593 bits (501), Expect = 5.838e-50 Identity = 91/122 (74.59%), Postives = 107/122 (87.70%), Query Frame = 1 Query: 361 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FAN + Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 124
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 1.217e-47 Identity = 88/130 (67.69%), Postives = 110/130 (84.62%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNRSS 732 MG F+++ + K ++RILMVGLD +GKTTILYKLKLGE+VTT+PTIGFN+ETVEYK I+FTVWD+GGQ+KIR LWRHYFQN QGLIFVVDS+D +R+ EAR+ELHR+L ++EL A +LVFAN + S Sbjct: 1 MGARFSRIAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDS 130
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.590e-47 Identity = 90/124 (72.58%), Postives = 106/124 (85.48%), Query Frame = 1 Query: 355 FTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 F+K FS+LF+ KEMRILM+GLDAAGKTTILYKLKL + V TIPT+GFNVETV YKNI F VWDVGGQDKIRPLWRHYF T+GLIFVVDS D +R+ EAR ELHR++++ E+RD +LLV AN + Sbjct: 9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQ 132
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.165e-44 Identity = 81/128 (63.28%), Postives = 105/128 (82.03%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG+ FT++FS +F KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ IRP WR YF NTQ +I+VVDS+D DR+ A++E H +L EDEL+ AV+L+FAN + Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 175.637 bits (444), Expect = 2.376e-43 Identity = 80/128 (62.50%), Postives = 105/128 (82.03%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG+ FT++FS +F KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ IRP WR YF NTQ +I+VVDS+D DR+ A++E H +L E+EL+ AV+L+FAN + Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42 Identity = 81/128 (63.28%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG F+ +FS LF +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFAN + Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42 Identity = 81/128 (63.28%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG F+ +FS LF +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFAN + Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42 Identity = 81/128 (63.28%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG F+ +FS LF +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFAN + Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42 Identity = 81/128 (63.28%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 343 MGLSFTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 MG F+ +FS LF +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFAN + Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQ 128
BLAST of FC875315 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.643e-42 Identity = 77/124 (62.10%), Postives = 101/124 (81.45%), Query Frame = 1 Query: 355 FTKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANNR 726 F+ +FS KKE RILM+GLD AGK+T+LYKLKLG++V+TIPTIGFNVET+EYKN+S TVWDVGGQ KIRPLW+HY+ + +IFVVDS DR+R+ E ++E+ +L +DEL+ +LVFAN + Sbjct: 13 FSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQ 136 The following BLAST results are available for this feature:
BLAST of FC875315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875315 ID=FC875315; Name=FC875315; organism=Citrus clementina; type=EST; length=732bpback to top |