FC875321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.137e-27 Identity = 49/88 (55.68%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 VTDS+++ V+ S+ PVLV+FWAPWCGPCRM+AP ++E+A++Y GK+ K+NTD++P +A++YGIRSIPT++ FK G+K + ++GAV Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAV 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO1_ANASO (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.137e-27 Identity = 49/88 (55.68%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 VTDS+++ V+ S+ PVLV+FWAPWCGPCRM+AP ++E+A++Y GK+ K+NTD++P +A++YGIRSIPT++ FK G+K + ++GAV Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAV 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_SYNY3 (Thioredoxin OS=Synechocystis sp. (strain PCC 6803) GN=trxA PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.940e-27 Identity = 50/88 (56.82%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 V+D+S++ V+ SE PVLV+FWAPWCGPCRM+AP ++E++++Y GKV KLNTD++PN A++YGIRSIPT++ FK G++ + ++GAV Sbjct: 7 VSDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNTASQYGIRSIPTLMIFKGGQRVDMVVGAV 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_PORYE (Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.322e-27 Identity = 51/91 (56.04%), Postives = 73/91 (80.22%), Query Frame = 1 Query: 364 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 V VTD+S++ VI++ PVLV+FWAPWCGPCRM++P ++E+A+EY + K+NTDD+P IA +YGIRSIPT++ FK GE+ +++IGAV Sbjct: 3 VSQVTDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKAGERVDTVIGAV 93
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_PORPU (Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.644e-27 Identity = 50/91 (54.95%), Postives = 74/91 (81.32%), Query Frame = 1 Query: 364 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 V VTD+S++ VI+++ PVLV+FWAPWCGPCRM++P ++ +A+EY + K+NTDD+P IA +YGIRSIPT++ FK+GE+ +++IGAV Sbjct: 3 VSQVTDASFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKSGERVDTVIGAV 93
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.628e-27 Identity = 52/88 (59.09%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 VTD S+E V++SE VLV+FWAPWCGPCRMI+P I+ELA+EY +V K+NTD++P+I+ +YGIRSIPT++ FK+G++ +++IGAV Sbjct: 7 VTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAV 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO1_SYNE7 (Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 46/88 (52.27%), Postives = 76/88 (86.36%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 VTD++++ V+ S PVLV+FWAPWCGPCRM+AP ++E+A++Y+ +V K+NTD++P++A++YGIRSIPT++ FK+G++ ++++GAV Sbjct: 7 VTDATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQYGIRSIPTLMIFKDGQRVDTVVGAV 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26 Identity = 52/91 (57.14%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 364 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 + V D+S+ VI+S PVLV+FWAPWCGPCRMIA I+E+A +Y K+ K+NTD +P IAT+YGIRSIPTV+ F NG+K ++++GAV Sbjct: 3 ISQVIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKVDTVVGAV 93
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_RICFE (Thioredoxin OS=Rickettsia felis GN=trxA PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.241e-26 Identity = 50/86 (58.14%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTDSS++ V+ S+ PVLV+FWA WCGPC+M+ P I+E++KE GKV K+N D++PNI ++YGIRSIPT++ FKNGE+K++ IG Sbjct: 5 VTDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNIPSEYGIRSIPTIMLFKNGEQKDTKIG 90
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_RICCN (Thioredoxin OS=Rickettsia conorii GN=trxA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 48/86 (55.81%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 V DSS++ V+ S+ PVLV+FWA WCGPC+M+ P I+E++KE GKV K+N D++PN ++YGIRSIPT++ FKNGE+K++ IG Sbjct: 5 VMDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNTPSEYGIRSIPTIMLFKNGEQKDTKIG 90 The following BLAST results are available for this feature:
BLAST of FC875321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875321 ID=FC875321; Name=FC875321; organism=Citrus clementina; type=EST; length=758bpback to top |