FC875321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD S+E V+ S+ PVLV+FWA WC PCRM+ P IEE++K+ KV K+N D++P I +KYGIRSIPTV+ FKNGE+K++ +G Sbjct: 5 VTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPSKYGIRSIPTVMLFKNGEQKDTKVG 90
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_RICPR (Thioredoxin OS=Rickettsia prowazekii GN=trxA PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24 Identity = 48/89 (53.93%), Postives = 69/89 (77.53%), Query Frame = 1 Query: 364 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 V VTDSS++N V+ S+ PV+V+FWA WCGPC+M+ P I+E++KE KV K+N D++P ++YGIRSIPT++ FKNGE+K++ IG Sbjct: 2 VNNVTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGIRSIPTIMLFKNGEQKDTKIG 90
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24 Identity = 50/88 (56.82%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 + + ++EN V+ SE VLV+FWAPWCGPCRMI P +EE+AKE+ KV ++NTD++PN+AT YGIRSIPT++ FK G++ +++IGAV Sbjct: 4 IDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEFNLKVV--QVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGAV 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.629e-24 Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 VT SWE+ V+ SE PVLVEF+ WCGPCRM+ I+E+A +YAGK+ C+ LN D+ +A +Y I+++P VL FKNGEK+ESI+G + Sbjct: 71 VTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTM 158
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_HAEIN (Thioredoxin OS=Haemophilus influenzae GN=trxA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23 Identity = 45/94 (47.87%), Postives = 72/94 (76.60%), Query Frame = 1 Query: 355 VNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 ++EV + D+ +E++V++S+ P+L++FWAPWCGPC+MIAP ++ELA E+AGKV K+N DD+ ++G+RSIPT+L KNG+ + +GA+ Sbjct: 1 MSEVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATPAQFGVRSIPTLLLIKNGQVVATQVGAL 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_RICTY (Thioredoxin OS=Rickettsia typhi GN=trxA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23 Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 364 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 V VTD S++N V+ S+ PV+V+FWA WCGPC+M+ P I+E++KE KV K+N D++P ++YG+RSIPT++ FKNGE+K++ IG Sbjct: 2 VNNVTDISFKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYGVRSIPTIMLFKNGEQKDTKIG 90
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STRAU (Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.458e-23 Identity = 45/87 (51.72%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 633 VT++++++ V+ S+ PVLV F PWCGPC+M+AP ++E+A EY GKV K+NTD++P +A++YG+RSIPT L FK GE +++GA Sbjct: 6 VTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQLASQYGVRSIPTRLMFKGGEVAANMVGA 92
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.434e-23 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P A KYGIR IPT+L FKNGE + +GA+ Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGAL 95
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.434e-23 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P A KYGIR IPT+L FKNGE + +GA+ Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGAL 95
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.434e-23 Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P A KYGIR IPT+L FKNGE + +GA+ Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGAL 95 The following BLAST results are available for this feature:
BLAST of FC875321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875321 ID=FC875321; Name=FC875321; organism=Citrus clementina; type=EST; length=758bpback to top |