FC875321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_ALIAC (Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.540e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 +TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P +++GI SIPT++ FK G + +IG Sbjct: 5 LTDANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19 Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 633 VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P A + + SIPT++ FK+G+ + I+GA Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGA 98
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19 Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 633 VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P A + + SIPT++ FK+G+ + I+GA Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGA 98
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+GE + ++G Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+GE + ++G Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGEPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_BUCBP (Thioredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 358 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 N + +TD ++ ++ S+ VLV+FWA WC PC+++AP +E++AKEY K+ K+N D +PN A KY IR IP +L FKN E + +GA+ Sbjct: 3 NCIVELTDGIFKQYILESKKAVLVDFWAEWCNPCKILAPILEDIAKEYEHKLIVTKINIDKNPNTAPKYSIRGIPALLLFKNSELVGTKVGAL 95
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAS (Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAR (Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89 The following BLAST results are available for this feature:
BLAST of FC875321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875321 ID=FC875321; Name=FC875321; organism=Citrus clementina; type=EST; length=758bpback to top |