FC875321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAN (Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAM (Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxA PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAC (Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + ++G Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 376 TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 633 TD +++ V+ +E PVLV+FWA WC PC+ IAP +EEL+ EYAGKV K++ + A KY IR+IP +L FK+GE +GA Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMFKDGEVVAQQVGA 94
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18 Identity = 40/87 (45.98%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 633 VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E ++ KL+ D +P +A ++ + SIPT++ F+ G+ + I+GA Sbjct: 354 VTDASFFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGA 440
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.646e-18 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 373 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIG 630 VTDS+++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A K+ + SIPT++ FK+GE + ++G Sbjct: 6 VTDSNFDENIQSGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVG 89
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.150e-18 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 400 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 ++ + PV+++FWAPWCGPCR AP E++A+E +GKV K+NT+ +++++GIRSIPT++ FKNG+ + + GAV Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAV 126 The following BLAST results are available for this feature:
BLAST of FC875321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875321 ID=FC875321; Name=FC875321; organism=Citrus clementina; type=EST; length=758bpback to top |